Commits for hiram

83aa49897ba111a554ff5b92659c868ca47ead0b Tue Jan 3 17:16:01 2023 -0800

correct use of new and improved rmToTrackHub.pl script no redmine
- src/hg/utils/automation/asmHubRepeatMasker.sh - lines changed 4, context: html, text, full: html, text

57d6df521aa11c79fa5e6d3f37f35804b3720a28 Thu Jan 5 12:32:08 2023 -0800

beginning of a script that can convert a fasta file into an assembly hub no redmine
- src/hg/utils/automation/faToHub.sh - lines changed 194, context: html, text, full: html, text

38942a57b41e68d9432452fa40e9bbae5a9f8085 Thu Jan 5 16:32:57 2023 -0800

now with appropriate symlinks for bbi and ixIxx files and template description pages for tracks and hub documentation no redmine
- src/hg/utils/automation/faToHub.sh - lines changed 74, context: html, text, full: html, text

fe1290a83aa62636e7f26092751571e016818493 Thu Jan 5 16:59:10 2023 -0800

correct NCBI Nucleotide database outlink and now with gap track no redmine
- src/hg/utils/automation/faToHub.sh - lines changed 25, context: html, text, full: html, text

ee980ed88db33f4dcde0edca82add49988f5d096 Sat Jan 7 17:09:41 2023 -0800

adding GCA_024364735.1_CEBAR_Bro_1.0 Chinese key per user request and now have GRCh38.p13 and p14 refs #29545
- src/hg/makeDb/doc/asmHubs/master.run.list - lines changed 3, context: html, text, full: html, text
- src/hg/makeDb/doc/plantsAsmHub/plants.orderList.tsv - lines changed 1, context: html, text, full: html, text