035323fe4a88aea8872eb11de17a3800321cf8e7 galt Wed Jan 18 19:59:51 2023 -0800 code cleanup based on htmlCheck output. refs #7914 diff --git src/hg/hgGene/gad.c src/hg/hgGene/gad.c index 6b1393c..816476c 100644 --- src/hg/hgGene/gad.c +++ src/hg/hgGene/gad.c @@ -57,86 +57,86 @@ { sqlSafef(query, sizeof(query), "select k.geneSymbol from kgXref k, gadAll g" " where k.kgId='%s' and k.geneSymbol = g.geneSymbol", geneId); itemName = sqlQuickString(conn, query); showCompleteGadList = FALSE; if (cgiOptionalString("showAllRef") != NULL) { if (sameWord(cgiOptionalString("showAllRef"), "Y") || sameWord(cgiOptionalString("showAllRef"), "y") ) { showCompleteGadList = TRUE; } } currentCgiUrl = cgiUrlString(); - printf("Genetic Association Database (archive): "); + printf("Genetic Association Database (archive): "); printf("", url); - printf("%s\n", itemName); + printf("%s\n", itemName); - printf("
CDC HuGE Published Literature: "); + printf("
CDC HuGE Published Literature: "); printf("", itemName); - printf("%s
\n", itemName); + printf("%s\n", itemName); /* List diseases associated with the gene */ sqlSafef(query, sizeof(query), "select distinct broadPhen from gadAll where geneSymbol='%s' and association = 'Y' order by broadPhen", itemName); sr = sqlMustGetResult(conn, query); row = sqlNextRow(sr); if (row != NULL) { upperDisease = replaceChars(row[0], "'", "''"); touppers(upperDisease); printf("
Positive Disease Associations: "); printf(""); - printf("%s\n", row[0]); + printf("%s\n", row[0]); row = sqlNextRow(sr); } while (row != NULL) { upperDisease = replaceChars(row[0], "'", "''"); touppers(upperDisease); printf(", "); - printf("%s\n", row[0]); + printf("%s\n", row[0]); row = sqlNextRow(sr); } sqlFreeResult(&sr); refPrinted = 0; sqlSafef(query, sizeof(query), "select broadPhen,reference,title,journal, pubMed, conclusion from gadAll where geneSymbol='%s' and association = 'Y' order by broadPhen", itemName); sr = sqlMustGetResult(conn, query); row = sqlNextRow(sr); if (row != NULL) printf("
Related Studies:
    "); while (row != NULL) { printf("
  1. %s ", row[0]); printf("
    %s, %s, %s.\n", row[1], row[2], row[3]); if (!sameWord(row[4], "")) { printf(" [PubMed "); printf("", "https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=Abstract&list_uids=", row[4],"&query_hl=1&itool=genome.ucsc.edu"); - printf("%s]\n", row[4]); + printf("%s]\n", row[4]); } printf("
    %s\n", row[5]); printf("
  2. \n"); refPrinted++; if ((!showCompleteGadList) && (refPrinted >= 3)) break; row = sqlNextRow(sr); } sqlFreeResult(&sr); printf("
"); if ((!showCompleteGadList) && (row != NULL)) { printf("           more ... "); printf(