c0af5f216f8ff00466f0d222cede7f491fd17d81
galt
  Fri Jan 20 23:09:35 2023 -0800
More fixes for stuff found by htmlCheck, refs #7914

diff --git src/hg/near/hgNear/examples.c src/hg/near/hgNear/examples.c
index eda4a11..382c97c 100644
--- src/hg/near/hgNear/examples.c
+++ src/hg/near/hgNear/examples.c
@@ -10,68 +10,70 @@
 #include "hgNear.h"
 
 void doExamples(struct sqlConnection *conn, struct column *colList)
 /* Put up controls and then some helpful text and examples.
  * Called when search box is empty. */
 {
 displayData(conn, colList, NULL);
 hPrintf("<TABLE BORDER=1 CELLSPACING=0 CELLPADDING=0 BGCOLOR=\"#"HG_COL_BORDER"\"><TR><TD>");
 hPrintf("<TABLE BORDER=0 CELLSPACING=1 CELLPADDING=9 BGCOLOR=\"#"HG_COL_INSIDE"\"><TR><TD>\n");
 hPrintf("%s",
  "<H3>About the Gene Sorter</H3>"
  "<P>This program displays a sorted table of genes that are related to "
  "one another.  The relationship can be one of several types, including "
  "protein-level homology, similarity of gene expression profiles, or "
  "genomic proximity. </P>"
- "<P>To display a gene and its relatives:"
+ "<P>To display a gene and its relatives:</P>"
  "<OL>"
- "<LI>Select a genome and assembly from the corresponding pull-down menus. " 
+ "<LI>Select a genome and assembly from the corresponding pull-down menus. </LI>" 
  "<LI>Type a word or phrase into the <em>search</em> text box to specify "
- "which gene should be displayed in the Gene Sorter. "
+ "which gene should be displayed in the Gene Sorter. </LI>"
+ "</OL>\n"
 );
 
 hPrintf("%s", genomeSetting("examples"));
 
 hPrintf("%s", 
+ "<OL>"
  "<LI>Choose the gene relationship with which you would like to sort the list "
- "by selecting an option from the <em>sort by</em> pull-down menu." 
- "<LI>Press the Go! button to display your results. " 
+ "by selecting an option from the <em>sort by</em> pull-down menu.</LI>" 
+ "<LI>Press the Go! button to display your results.</LI>" 
  "</OL>"
- "</P> "
+ "<BR>\n"
  );
 
 hPrintf("%s", 
  "<P>Following a successful search, the Gene Sorter displays a table containing "
  "the specified gene -- highlighted in light green -- and its relatives, "
  "each on a separate line.  To adjust the number of rows "
  "shown, select an option from the <em>display</em> pull-down menu. </P>"
  "<P>The default set of table columns -- "
  "which can be expanded, reduced, and rearranged via the <em>configure</em> "
  "button -- shows additional information about the genes. Some of the column "
  "data, such as those in the <em>BLAST E-value</em> and <em>%ID</em> columns, "
  "are calculated relative to the highlighted gene. To select a different gene "
  "in the list, click on its name. "
  "Clicking on a gene's <em>Genome Position</em> will open the UCSC Genome "
  "Browser to the location of that gene. Similarly, clicking on a gene's "
  "<em>Description</em> will open a page showing detailed information about "
  "the gene.</P>"
  "<P>One of the most powerful features of the Gene Sorter is its "
  "filtering capabilities, accessed via the <em>filter</em> button. Use the "
  "filter to fine-tune the list of displayed genes to a subset based on a "
  "selection of detailed and flexible criteria. For example, the filter may "
  "be used to select all human genes over-expressed in the cerebellum that have "
  "GO-annotated G-protein coupled receptor activity.</P>"
  "<P>The Gene Sorter offers two options for displaying and downloading sequence "
  "associated with the genes in the table. Clicking on the <em>sequence</em> "
  "button will fetch associated protein, mRNA, promoter, or genomic sequence.  "
  "To dump the table into a simple tab-delimited format suitable for "
  "import into a spreadsheet or relational database, click the <em>text</em> "
- "button. "
+ "button. </P>"
  "<P>The UCSC Gene Sorter was designed and implemented by Jim Kent, "
  "Fan Hsu, Donna Karolchik, David Haussler, and the UCSC Genome Bioinformatics "
  "Group. This work is supported by a grant from the National Human Genome "
  "Research Institute and by the Howard Hughes Medical Institute.</P>"
  );
 hPrintf("</TD></TR></TABLE>");
 hPrintf("</TD></TR></TABLE>");
 }