b982d7a99af92cfc08ae7c0f76d07ae6c55657ac gperez2 Tue Jan 17 11:14:01 2023 -0800 Fixing 404 link for the Static Page Cronjob 2023-1-15, no RM diff --git src/hg/htdocs/FAQ/FAQformat.html src/hg/htdocs/FAQ/FAQformat.html index a11099c..0ea7326 100755 --- src/hg/htdocs/FAQ/FAQformat.html +++ src/hg/htdocs/FAQ/FAQformat.html @@ -55,31 +55,31 @@ </div> <a name="ENCODE"></a> <h6>ENCODE-specific formats</h6> <ul> <li><a href="#format13">ENCODE broadPeak format</a></li> <li><a href="#format14">ENCODE gappedPeak format</a></li> <li><a href="#format12">ENCODE narrowPeak format</a></li> <li><a href="#format16">ENCODE pairedTagAlign format</a></li> <li><a href="#format17">ENCODE peptideMapping format</a></li> <li><a href="#format11">ENCODE RNA elements format</a></li> <li><a href="#format15">ENCODE tagAlign format</a></li> </ul> <h6>Download-only formats</h6> <ul> <li><a href="#format7">.2bit format</a></li> - <li><a href="http://genetics.bwh.harvard.edu/pph/FASTA.html" target="_blank">.fasta format</a></li> + <li><a href="https://arep.med.harvard.edu/seqanal/fasta.html" target="_blank">.fasta format</a></li> <li><a href="http://maq.sourceforge.net/fastq.shtml" target="_blank">.fastQ format</a></li> <li><a href="#format8">.nib format</a></li> </ul> <hr> <p> <a href="index.html">Return to FAQ Table of Contents</a></p> <a name="format1"></a> <h2>BED format</h2> <p> BED (Browser Extensible Data) format provides a flexible way to define the data lines that are displayed in an annotation track. BED lines have three required fields and nine additional optional fields. The number of fields per line must be consistent throughout any single set of data in an annotation track. The order of the optional fields is binding: lower-numbered fields must always be populated if higher-numbered fields are used.</p>