1a2aa31bfa14f809ee4093cea7b436e331b86ff4 hiram Thu Feb 16 14:56:34 2023 -0800 improved common names for fungi and bacteria an lower limits for valid number of tracks in bacteria and plants refs #29545 diff --git src/hg/makeDb/doc/asmHubs/verifyOnDownload.sh src/hg/makeDb/doc/asmHubs/verifyOnDownload.sh index bbf8a85..7ffb3e2 100755 --- src/hg/makeDb/doc/asmHubs/verifyOnDownload.sh +++ src/hg/makeDb/doc/asmHubs/verifyOnDownload.sh @@ -13,35 +13,35 @@ # printf "usage: ./verifyOnDownload.sh <GCF/012/345/678/GCF_012345678.nn>\n" 1>&2 # ${toolsDir}/mkSendList.pl ${orderList} | while read F; do \ # ${toolsDir}/verifyOnDownload.sh $$F < /dev/null; done export host=$1 export orderList=$2 export successCount=0 export doneCount=0 export fileName=`basename $orderList` export subset=${fileName%.orderList.tsv} export minTrackCount=11 if [ "${subset}" == "invertebrate" ]; then minTrackCount=9 elif [ "${subset}" == "bacteria" ]; then - minTrackCount=9 + minTrackCount=8 elif [ "${subset}" == "legacy" ]; then minTrackCount=9 elif [ "${subset}" == "plants" ]; then - minTrackCount=11 + minTrackCount=10 elif [ "${subset}" == "birds" ]; then minTrackCount=11 elif [ "${subset}" == "fish" ]; then minTrackCount=11 elif [ "${subset}" == "mammals" ]; then minTrackCount=9 elif [ "${subset}" == "vertebrate" ]; then minTrackCount=11 elif [ "${subset}" == "archaea" ]; then minTrackCount=9 elif [ "${subset}" == "viral" ]; then minTrackCount=7 fi # printf "# DBG subset '%s' min: %d\n" "${subset}" "${minTrackCount}" 1>&2