Commits for braney

v443_base to v444_preview (2023-01-30 to 2023-02-06) v444

5765efc706b41b9528d3a2a17a865f898473ce05 Wed Feb 1 13:14:08 2023 -0800

• fix a bug in calculating knownCanonical that b0b reported that was the result of a bone-headed parsing of the hash structure. While I was in there I prioritized MANE membership over the appris tags.
  • src/hg/makeDb/makeGencodeKnownGene/makeGencodeKnownGene.c - lines changed 6, context: html, text, full: html, text

693a69d6c9bb0639e3b4e37581ade795b4c2a7c7 Wed Feb 1 15:18:33 2023 -0800

• add option to show chains as snakes under hg.conf control
  • src/hg/hgTracks/chainTrack.c - lines changed 9, context: html, text, full: html, text
  • src/hg/lib/hui.c - lines changed 24, context: html, text, full: html, text

1d5248e54214efc78f88eca4aa110bf0cc7e1a33 Wed Feb 1 15:45:06 2023 -0800

• don't require a twoBit in order to show snakes
  • src/hg/hgTracks/chainSnakeTrack.c - lines changed 8, context: html, text, full: html, text

ab5e0ceb76e4abc3fd00d225f758a88f3c8fca34 Thu Feb 2 14:44:56 2023 -0800

• changed it so by default users can duplicate tracks
  • src/hg/lib/dupTrack.c - lines changed 1, context: html, text, full: html, text

edfe4db20446f5c266f2ba1155fc694d30fdf00c Fri Feb 3 09:10:41 2023 -0800

• ongoing work on snake display for chains
  • src/hg/hgTracks/chainSnakeTrack.c - lines changed 26, context: html, text, full: html, text
  • src/hg/hgc/hgc.c - lines changed 6, context: html, text, full: html, text
  • src/hg/inc/snakeUi.h - lines changed 1, context: html, text, full: html, text