105fed4179457f1d6ae6fb3daa94cd0cd0270451
hiram
  Thu Feb 2 12:48:45 2023 -0800
catch up with current crontab in otto user no redmine

diff --git src/hg/utils/otto/otto.crontab src/hg/utils/otto/otto.crontab
index 81dd16c..b467435 100644
--- src/hg/utils/otto/otto.crontab
+++ src/hg/utils/otto/otto.crontab
@@ -44,31 +44,31 @@
 
 # PanelApp
 MAILTO=max@soe.ucsc.edu,lrnassar@ucsc.edu
 10 10 * * 2 /hive/data/outside/otto/panelApp/updatePanelApp
 
 #DECIPHER - Reactivated 5/13/2022 by Lou
 11 4 * * * /hive/data/outside/otto/decipher/decipherWrapper.sh
 
 #GWAS Catalog
 41 4 * * 3  /hive/data/outside/otto/gwas/gwasWrapper.sh
 
 #GeneReviews
 00 8 * * 2 /hive/data/outside/otto/geneReviews/geneReviewsWrapper.sh
 
 #LRG
-57 9 1 4,6,12 * /hive/data/outside/otto/lrg/lrgWrapper.sh
+57 9 1 * * /hive/data/outside/otto/lrg/lrgWrapper.sh
 
 #dbVar
 13 8 2 * * /hive/data/outside/otto/dbVar/dbVarWrapper.sh
 
 #Orphanet
 10 7 10 * * /hive/data/outside/otto/orphanet/orphanetWrapper.sh
 
 #ClinVar
 MAILTO=max@soe.ucsc.edu,lrnassar@ucsc.edu
 08 00 8 * * umask 002; /hive/data/outside/otto/clinvar/doUpdate.sh
 
 #OMIM
 17 4 * * *  /hive/data/outside/otto/omim/omimWrapper.sh 2>&1
 
 #LOVD
@@ -89,20 +89,26 @@
 33 09 * * * /hive/data/outside/otto/grcIncidentDb/runUpdate.sh makeItSo
 
 #NCBI RefSeq
 MAILTO=lrnassar@ucsc.edu,hiram@soe.ucsc.edu
 23 8 * * 3 /hive/data/outside/otto/ncbiRefSeq/ottoNcbiRefSeq.sh
 
 #Index page public session thumbnails update
 MAILTO=lrnassar@ucsc.edu,gperez2@ucsc.edu
 11 1 * * 4 /cluster/software/bin/python3.6 /cluster/bin/scripts/buildPublicSessionThumbnailsIndexPage.py /usr/local/apache/htdocs/
 
 #OMIM Upload
 MAILTO=lrnassar@ucsc.edu
 HGDB_CONF=/cluster/home/otto/.hg.conf.beta
 15 05 * * *  /hive/data/outside/otto/omim/omimUploadWrapper.sh
 
+
+# UniProt massive 110+ database update, takes 3-4 days.
+#Format: Minute - Hour - DayofMonth month Day-of-week
+MAILTO=max@soe.ucsc.edu,lrnassar@ucsc.edu
+00 11 16 * * /hive/data/outside/otto/uniprot/doUpdate.sh run
+
 MAILTO=bwick@ucsc.edu
 # Cell Browser news sec update by Matt/Brittney Sept 2022
 04 12 * * 1-5 ~bwick/cellBrowser/ucsc/updateNewsSec -r
 
 #Format: Minute - Hour - DayofMonth month Day-of-week