2e6b73ac1803862338f283d9b353fe2e10aa0204 braney Sun Feb 12 14:17:18 2023 -0800 rename file to be more generic since display works on chains and psls diff --git src/hg/hgTracks/makefile src/hg/hgTracks/makefile index b780ee6..11fe751 100644 --- src/hg/hgTracks/makefile +++ src/hg/hgTracks/makefile @@ -1,69 +1,69 @@ kentSrc = ../.. include ../../inc/common.mk HG_INC += -I../../optimalLeaf L += ${MYSQLLIBS} MYLIBDIR = ../../lib/${MACHTYPE} MYLIBS = ${MYLIBDIR}/jkhgapcgi.a ${MYLIBDIR}/jkhgap.a ${MYLIBDIR}/jkweb.a ${MYLIBDIR}/optimalLeaf.a COPT = -ggdb A = hgTracks RENDERA = hgRenderTracks COMMONO = adjacencyTrack.o pubsTracks.o altGraphXTrack.o bamTrack.o barChartTrack.o bedGraph.o \ - bedTrack.o bigBedTrack.o bigRmskTrack.o bigWarn.o bigWigTrack.o chainSnakeTrack.o \ + bedTrack.o bigBedTrack.o bigRmskTrack.o bigWarn.o bigWigTrack.o \ chainTrack.o cgapSageTrack.o chromGraphTrack.o config.o container.o contigTrack.o \ coverageTrack.o cytoBandTrack.o cutterTrack.o \ expRatioTracks.o factorSource.o hgTracks.o interactTrack.o \ gencodeTracks.o goldTrack.o gtexTracks.o gtexEqtlClusterTrack.o gvfTrack.o \ halSnakeTrack.o lollyTrack.o longRangeTrack.o loweLabTracks.o lrgTrack.o \ mafTrack.o makeItemsTrack.o menu.o multiWig.o netTrack.o peptideAtlasTrack.o pslTrack.o \ recTrackSets.o rmskJoinedTrack.o rmskTrack.o \ - sampleTracks.o searchTracks.o simpleTracks.o sortWig.o switchGear.o transMapTracks.o \ + sampleTracks.o searchTracks.o simpleTracks.o snake.o sortWig.o switchGear.o transMapTracks.o \ wabaTrack.o wigTrack.o cds.o \ wigMafTrack.o encode.o variation.o vcfTrack.o transcriptome.o\ rnaFoldTrack.o retroGene.o hapmapTrack.o rnaPLFoldTrack.o\ wiki.o wikiTrack.o imageV2.o extTools.o hicTrack.o O = mainMain.o ${COMMONO} export RENDERO = renderMain.o ${COMMONO} include ../../inc/cgi_build_rules.mk ifeq (${GBROWSE}, 1) GBROWSE_D=-DGBROWSE A = gbrowseTest O = $A.o oneTrack.o \ bedGraph.o cds.o chainTrack.o mafTrack.o netTrack.o pslTrack.o \ simpleTracks.o wigMafTrack.o wigTrack.o imageV2.o else GBROWSE_D= endif %.o: %.c ${CC} ${COPT} ${CFLAGS} ${GBROWSE_D} ${LOWELAB_DEFS} ${HG_DEFS} ${HG_WARN} ${HG_INC} ${XINC} -o $@ -c $< mgsc: strip mv $A ${CGI_BIN}/$A compile: compileMain ${RENDERA} compileMain: $O ${CC} ${CFLAGS} -o $A $O ${MYLIBS} ${L} cp extTools.ra ${CGI_BIN_DEST} ${RENDERA}: ${RENDERO} ${MAKE} -f makefile.hgRenderTracks ${MAKECMDGOALS} wigTrack.o: wigCommon.h bedGraph.o: wigCommon.h switchGear.o: switchGear.h cds.o: cds.h hgTracks.o: cds.h pslTrack.o: cds.h clean:: rm -f ct_hgwdev_*.bed hgtIdeo_*.gif hgt_*.gif rm -f ${RENDERA} ${RENDERO}