1744d98b15270fdbeb3abf81ee065ddfbd20f884
hiram
  Tue Feb 7 12:59:12 2023 -0800
use a local vcfTabix track to test not supported no redmine

diff --git src/hg/hubApi/tests/makefile src/hg/hubApi/tests/makefile
index 784ebb2..7e64d76 100644
--- src/hg/hubApi/tests/makefile
+++ src/hg/hubApi/tests/makefile
@@ -1009,32 +1009,32 @@
 	@printf "### $@ 'https://hgwdev-hiram.gi.ucsc.edu/getData/track?track=pgKb1454;chrom=chr1;genome=hg19;jsonOutputArrays=1;maxItemsOutput=5'\n"
 	@./jsonConsumer.pl -endpoint="/getData/track" -genome="hg19" -track="pgKb1454" -chrom="chr1" -jsonOutputArrays -maxItemsOutput=5 2>&1 | egrep -v "${excludeLines}" | sed -e 's#https://.*/getData#/getData#;' | gzip -c >> testOutput/$@.gz
 	@zdiff expected/$@.gz testOutput/$@.gz
 
 ##############################################################################
 ### notSupported
 ##############################################################################
 # request a track type that is not yet supported: bam
 notSup01: setOutput
 	@printf "### $@ 'https://hgwdev-hiram.gi.ucsc.edu/cgi-bin/hubApi/getData/track?track=shMethylSubtrack;chrom=chr1;genome=hg19;hubUrl=http://lasallelab.genomecenter.ucdavis.edu/UCSChub/hub.txt;jsonOutputArrays=1;maxItemsOutput=5'\n"
 	@./jsonConsumer.pl -endpoint="/getData/track" -hubUrl="http://lasallelab.genomecenter.ucdavis.edu/UCSChub/hub.txt" -genome="hg19" -track="shMethylSubtrack" -chrom="chr1" -jsonOutputArrays -maxItemsOutput=5 2>&1 | egrep -v "${excludeLines}" | sed -e 's#https://.*/getData#/getData#;' | gzip -c > testOutput/$@.gz
 	@zdiff expected/$@.gz testOutput/$@.gz
 
 # request a track type that is not yet supported: vcfTabix
 notSup02: setOutput
-	@printf "### $@ 'https://hgwdev-hiram.gi.ucsc.edu/cgi-bin/hubApi/getData/track?track=variants;chrom=chr1;genome=danRer11;hubUrl=http://research.nhgri.nih.gov/manuscripts/Burgess/zebrafish/downloads/NHGRI-1/hub.txt;jsonOutputArrays=1;maxItemsOutput=5'\n"
-	@./jsonConsumer.pl -endpoint="/getData/track" -hubUrl="http://research.nhgri.nih.gov/manuscripts/Burgess/zebrafish/downloads/NHGRI-1/hub.txt" -genome="danRer11" -track="variants" -chrom="chr1" -jsonOutputArrays -maxItemsOutput=5 2>&1 | egrep -v "${excludeLines}" | sed -e 's#https://.*/getData#/getData#;' | gzip -c > testOutput/$@.gz
+	@printf "### $@ 'https://hgwdev-api.gi.ucsc.edu/cgi-bin/hubApi/getData/track?track=gnomadGenomesVariantsV3;chrom=chr21;start=5033429;end=5033498;genome=hg38;jsonOutputArrays=1;maxItemsOutput=5'\n"
+	@./jsonConsumer.pl -endpoint="/getData/track" -genome="hg38" -track="gnomadGenomesVariantsV3" -chrom="chr21" -start="5033429" -end="5033498" -jsonOutputArrays -maxItemsOutput=5 2>&1 | egrep -v "${excludeLines}" | sed -e 's#https://.*/getData#/getData#;' | gzip -c > testOutput/$@.gz
 	@zdiff expected/$@.gz testOutput/$@.gz
 
 # request a track type that is not yet supported: ld2
 notSup03: setOutput
 	@printf "### $@ 'https://hgwdev-hiram.gi.ucsc.edu/getData/track?track=hapmapLdPhCeu;genome=hg19'\n"
 	@./jsonConsumer.pl -endpoint="/getData/track" -genome=hg19 -track="hapmapLdPhCeu" 2>&1 | egrep -v "${excludeLines}" | sed -e 's#https://.*/getData#/getData#;' | gzip -c > testOutput/$@.gz
 	@zdiff expected/$@.gz testOutput/$@.gz
 
 # request chromosome list from a track that is a container, not a data track
 notSup07: setOutput
 	@printf "### $@ 'https://hgwdev-hiram.gi.ucsc.edu/list/chromosomes?track=gdcCancer;genome=hg38'\n"
 	@./jsonConsumer.pl -endpoint="/list/chromosomes" -genome=hg38 -track="gdcCancer" 2>&1 | egrep -v "${excludeLines}" | sed -e 's#https://.*/list#/list#;' | gzip -c > testOutput/$@.gz
 	@zdiff expected/$@.gz testOutput/$@.gz
 
 # hapmapLdPhCeu does not have an 'as' definiton in tableDescriptions