cf9bdd51cff9f2d4c01f8041e4c0c4708887571b
hiram
  Fri Feb 10 12:18:15 2023 -0800
moved asmEquivalent.h to ../inc where it belongs no redmine

diff --git src/hg/lib/asmEquivalent.h src/hg/lib/asmEquivalent.h
deleted file mode 100644
index fe4e0d7..0000000
--- src/hg/lib/asmEquivalent.h
+++ /dev/null
@@ -1,101 +0,0 @@
-/* asmEquivalent.h was originally generated by the autoSql program, which also 
- * generated asmEquivalent.c and asmEquivalent.sql.  This header links the database and
- * the RAM representation of objects. */
-
-#ifndef ASMEQUIVALENT_H
-#define ASMEQUIVALENT_H
-
-#include "jksql.h"
-#define ASMEQUIVALENT_NUM_COLS 7
-
-extern char *asmEquivalentCommaSepFieldNames;
-
-enum asmEquivalentSourceAuthority
-    {
-    asmEquivalentEnsembl = 0,
-    asmEquivalentUcsc = 1,
-    asmEquivalentGenbank = 2,
-    asmEquivalentRefseq = 3,
-    };
-enum asmEquivalentDestinationAuthority
-    {
-    asmEquivalentEnsembl = 0,
-    asmEquivalentUcsc = 1,
-    asmEquivalentGenbank = 2,
-    asmEquivalentRefseq = 3,
-    };
-struct asmEquivalent
-/* Equivalence relationship of assembly versions, Ensembl: UCSC, NCBI genbank/refseq */
-    {
-    struct asmEquivalent *next;  /* Next in singly linked list. */
-    char *source;	/* assembly name */
-    char *destination;	/* equivalent assembly name */
-    enum asmEquivalentSourceAuthority sourceAuthority;	/* origin of source assembly */
-    enum asmEquivalentDestinationAuthority destinationAuthority;	/* origin of equivalent assembly */
-    long long matchCount;	/* number of exactly matching sequences */
-    long long sourceCount;	/* number of sequences in source assembly */
-    long long destinationCount;	/* number of sequences in equivalent assembly */
-    };
-
-void asmEquivalentStaticLoad(char **row, struct asmEquivalent *ret);
-/* Load a row from asmEquivalent table into ret.  The contents of ret will
- * be replaced at the next call to this function. */
-
-struct asmEquivalent *asmEquivalentLoadByQuery(struct sqlConnection *conn, char *query);
-/* Load all asmEquivalent from table that satisfy the query given.  
- * Where query is of the form 'select * from example where something=something'
- * or 'select example.* from example, anotherTable where example.something = 
- * anotherTable.something'.
- * Dispose of this with asmEquivalentFreeList(). */
-
-void asmEquivalentSaveToDb(struct sqlConnection *conn, struct asmEquivalent *el, char *tableName, int updateSize);
-/* Save asmEquivalent as a row to the table specified by tableName. 
- * As blob fields may be arbitrary size updateSize specifies the approx size
- * of a string that would contain the entire query. Arrays of native types are
- * converted to comma separated strings and loaded as such, User defined types are
- * inserted as NULL. This function automatically escapes quoted strings for mysql. */
-
-struct asmEquivalent *asmEquivalentLoad(char **row);
-/* Load a asmEquivalent from row fetched with select * from asmEquivalent
- * from database.  Dispose of this with asmEquivalentFree(). */
-
-struct asmEquivalent *asmEquivalentLoadAll(char *fileName);
-/* Load all asmEquivalent from whitespace-separated file.
- * Dispose of this with asmEquivalentFreeList(). */
-
-struct asmEquivalent *asmEquivalentLoadAllByChar(char *fileName, char chopper);
-/* Load all asmEquivalent from chopper separated file.
- * Dispose of this with asmEquivalentFreeList(). */
-
-#define asmEquivalentLoadAllByTab(a) asmEquivalentLoadAllByChar(a, '\t');
-/* Load all asmEquivalent from tab separated file.
- * Dispose of this with asmEquivalentFreeList(). */
-
-struct asmEquivalent *asmEquivalentCommaIn(char **pS, struct asmEquivalent *ret);
-/* Create a asmEquivalent out of a comma separated string. 
- * This will fill in ret if non-null, otherwise will
- * return a new asmEquivalent */
-
-void asmEquivalentFree(struct asmEquivalent **pEl);
-/* Free a single dynamically allocated asmEquivalent such as created
- * with asmEquivalentLoad(). */
-
-void asmEquivalentFreeList(struct asmEquivalent **pList);
-/* Free a list of dynamically allocated asmEquivalent's */
-
-void asmEquivalentOutput(struct asmEquivalent *el, FILE *f, char sep, char lastSep);
-/* Print out asmEquivalent.  Separate fields with sep. Follow last field with lastSep. */
-
-#define asmEquivalentTabOut(el,f) asmEquivalentOutput(el,f,'\t','\n');
-/* Print out asmEquivalent as a line in a tab-separated file. */
-
-#define asmEquivalentCommaOut(el,f) asmEquivalentOutput(el,f,',',',');
-/* Print out asmEquivalent as a comma separated list including final comma. */
-
-void asmEquivalentJsonOutput(struct asmEquivalent *el, FILE *f);
-/* Print out asmEquivalent in JSON format. */
-
-/* -------------------------------- End autoSql Generated Code -------------------------------- */
-
-#endif /* ASMEQUIVALENT_H */
-