fba0bd9bb1eb54ead37e38b5d6ac9cc040c77ffd
lrnassar
  Tue Mar 7 16:51:30 2023 -0800
Adding pennantIcon for new track, refs #30320

diff --git src/hg/makeDb/trackDb/trackDb.ra src/hg/makeDb/trackDb/trackDb.ra
index 242ea11..01ae3ca 100644
--- src/hg/makeDb/trackDb/trackDb.ra
+++ src/hg/makeDb/trackDb/trackDb.ra
@@ -3015,30 +3015,56 @@
 filterValues.varClass deletion|Deletion,delins|Deletion-Insertion,insertion|Insertion,multipleNucleotideSubstitution|Multiple nucleotide substitution,substitution|Substitution,sequence alteration|Sequence alteration
 filterLabel.varClass Variant class from EVA SO term
 filterLabel.ucscClass Functional effect per UCSC Variant Annotation
 filterValues.ucscClass downstream_gene_variant|Downstream gene variant,upstream_gene_variant|Upstream gene variant,intron_variant|Intron variant,NMD_transcript_variant|Nonsense-mediated mRNA decay (NMD) variant,5_prime_UTR_variant|5 prime UTR variant,3_prime_UTR_variant|3 prime UTR variant,missense_variant|Missense variant,synonymous_variant|Synonymous variant,non_coding_transcript_exon_variant|Non-coding transcript exon variant,no_sequence_alteration|No sequence alteration,splice_region_variant|Splice region variant,frameshift_variant|Frameshift variant,stop_gained|Stop gained,splice_acceptor_variant|Splice acceptor variant,inframe_deletion|Inframe deletion,inframe_insertion|Inframe insertion,splice_donor_variant|Splice donor variant,coding_sequence_variant|Coding sequence variant,initiator_codon_variant|Initiator codon variant,stop_lost|Stop lost,stop_retained_variant|Stop retained variant,intergenic_variant|Intergenic variant
 filterType.ucscClass multipleListOnlyOr
 filterValues.itemRgb 255,,0,,0|Protein-altering and splice variants,0,,128,,0|Synonymous variants,0,,0,,255|Non-coding transcripts or UTR variants,0,,0,,0|Intergenic and intronic variants
 filterLabel.itemRgb General variant types by color grouping
 maxWindowCoverage 250000
 maxItems 1000000
 
 searchTable evaSnp
 searchType bigBed
 searchMethod exact
 padding 20
 
+track evaSnp4
+shortLabel EVA SNP Release 4
+longLabel Short Genetic Variants from European Variant Archive Release 4
+type bigBed 9 +
+group varRep
+visibility dense
+itemRgb on
+mouseOver $ref>$alt $ucscClass $aaChange
+bigDataUrl /gbdb/$D/bbi/evaSnp4.bb
+url https://www.ebi.ac.uk/eva/?variant&accessionID=$$
+filterValues.varClass deletion|Deletion,delins|Deletion-Insertion,insertion|Insertion,multipleNucleotideSubstitution|Multiple nucleotide substitution,substitution|Substitution,sequence alteration|Sequence alteration
+filterLabel.varClass Variant class from EVA SO term
+filterLabel.ucscClass Functional effect per UCSC Variant Annotation
+filterValues.ucscClass downstream_gene_variant|Downstream gene variant,upstream_gene_variant|Upstream gene variant,intron_variant|Intron variant,NMD_transcript_variant|Nonsense-mediated mRNA decay (NMD) variant,5_prime_UTR_variant|5 prime UTR variant,3_prime_UTR_variant|3 prime UTR variant,missense_variant|Missense variant,synonymous_variant|Synonymous variant,non_coding_transcript_exon_variant|Non-coding transcript exon variant,no_sequence_alteration|No sequence alteration,splice_region_variant|Splice region variant,frameshift_variant|Frameshift variant,stop_gained|Stop gained,splice_acceptor_variant|Splice acceptor variant,inframe_deletion|Inframe deletion,inframe_insertion|Inframe insertion,splice_donor_variant|Splice donor variant,coding_sequence_variant|Coding sequence variant,initiator_codon_variant|Initiator codon variant,stop_lost|Stop lost,stop_retained_variant|Stop retained variant,intergenic_variant|Intergenic variant
+filterType.ucscClass multipleListOnlyOr
+filterValues.itemRgb 255,,0,,0|Protein-altering and splice variants,0,,128,,0|Synonymous variants,0,,0,,255|Non-coding transcripts or UTR variants,0,,0,,0|Intergenic and intronic variants
+filterLabel.itemRgb General variant types by color grouping
+maxWindowCoverage 250000
+maxItems 1000000
+pennantIcon New red ../goldenPath/newsarch.html#XXXXXX "Released Xxx. xx, xxxx"
+
+searchTable evaSnp4
+searchType bigBed
+searchMethod exact
+padding 20
+
 track HLTOGAannotvHg38v1
 bigDataUrl /gbdb/$D/TOGAvHg38v1/HLTOGAannotVsHg38v1.bb
 shortLabel TOGA vs. hg38
 longLabel TOGA annotations using human/hg38 as reference
 group genes
 visibility hide
 itemRgb on
 type bigBed 12
 searchIndex name
 searchTrix  /gbdb/$D/TOGAvHg38v1/HLTOGAannotVsHg38v1.ix
 html TOGAannotation
 
 # searchTable HLTOGAannotvsHg38v1BIG
 # searchType bigBed
 # searchMethod fuzzy