1cb645d2d695768372404159511419112e4000f6 lrnassar Wed Mar 8 17:11:32 2023 -0800 Disabling heartbeat messages to reduce spam. These have been running this way for a while with no noticible issues. Refs #28331 diff --git src/hg/utils/otto/omim/checkOmimUpload.sh src/hg/utils/otto/omim/checkOmimUpload.sh index 095bd77..701cc43 100755 --- src/hg/utils/otto/omim/checkOmimUpload.sh +++ src/hg/utils/otto/omim/checkOmimUpload.sh @@ -25,46 +25,46 @@ # | mail -s "ERROR: OMIM watch" ${DEBUG_EMAIL} exit 255 fi cd "${WORKDIR}"/upload rm -f omimGene2.date omimAvSnp.date touch omimGene2.date omimAvSnp.date hgsqlTableDate hg19 omimGene2 omimGene2.date hgsqlTableDate hg19 omimAvSnp omimAvSnp.date if [ ! omimGene2.date -nt upload.omim2.date -a ! omimAvSnp.date -nt upload.omimAvSnp.date ] then # echo "No new table." exit 0; fi -echo doing upload +#echo doing upload # assumes hg18 and hg19 have the same tables hgsql -h hgwbeta -N -e "SHOW TABLES LIKE 'omim%' " hg19 > omimTables rm -f omimTableDump.tar omimTableDump.tar.gz for db in hg18 hg19 hg38 do for table in `cat omimTables` do # echo $db.$table.tab >> pushList hgsql -N -e "SELECT * FROM $table" $db > $db.$table.tab tar -rf omimTableDump.tar $db.$table.tab rm $db.$table.tab done done if [ ! -e omimTableDump.tar ] then echo "Process failed" exit 1 fi gzip omimTableDump.tar cp -p omimTableDump.tar.gz "$UPLOADDIR/omimTableDump.tgz" mv omimGene2.date upload.omim2.date mv omimAvSnp.date upload.omimAvSnp.date -echo "Process successful" +#echo "Process successful" exit 0