726f0d82c65b613847011321bc7e9cd493311e92 chmalee Fri Feb 24 10:56:06 2023 -0800 Update Stanford source links on hgGene to new princeton location, refs #30694 diff --git src/hg/hgGene/hgGeneData/Rat/links.ra src/hg/hgGene/hgGeneData/Rat/links.ra index e242911..48d9e0b 100644 --- src/hg/hgGene/hgGeneData/Rat/links.ra +++ src/hg/hgGene/hgGeneData/Rat/links.ra @@ -1,36 +1,36 @@ # Rat-specific link info. name rgd shortLabel RGD tables kgXref priority 10 idSql select uniProt.extDbRef.extAcc1 from uniProt.extDbRef,uniProt.extDb,kgXref where uniProt.extDb.val = 'RGD' and uniProt.extDb.id = uniProt.extDbRef.extDb and uniProt.extDbRef.acc = kgXref.spID and kgXref.kgID = '%s' url http://rgd.mcw.edu/tools/genes/genes_view.cgi?id=%s name cgap url http://cgap.nci.nih.gov/Genes/GeneInfo?ORG=Rn&CID=%s name reactome shortLabel Reactome tables proteome.spReactomeEvent kgXref idSql select spReactomeId.spID from proteome.spReactomeId,proteome.spVariant,kgXref where kgXref.kgID = '%s' and kgXref.spID=variant and spReactomeId.spID=parent; url http://www.reactome.org/content/query?q=%s priority 10 name ensembl url http://www.ensembl.org/Rattus_norvegicus/geneview?transcript=%s name geneNetwork shortLabel GeneNetwork tables geneNetworkId idSql select Id from geneNetworkId, knownToRefSeq where Id = value and name='%s' url http://www.genenetwork.org/webqtl/WebQTL.py?cmd=sch&refseq=%s&species=rat priority 10 name stanfordSource -shortLabel Stanford SOURCE +shortLabel SOURCE tables kgXref idSql select mRNA from kgXref where kgID = '%s' -url http://smd.stanford.edu/cgi-bin/source/sourceResult?organism=Rn&option=Number&criteria=%s&choice=Gene +url http://source-search.princeton.edu/cgi-bin/source/sourceResult?organism=Rn&option=Number&criteria=%s&choice=Gene priority 10