2cd36bf868d2c1dd42dd452f9b9724edd4ee67e9 hiram Sun Apr 2 22:11:13 2023 -0700 25 CCGP assemblies done refs #30912 diff --git src/hg/makeDb/doc/ccgpAsmHub/ccgp.orderList.tsv src/hg/makeDb/doc/ccgpAsmHub/ccgp.orderList.tsv index 9459f3b..6e25bdf 100644 --- src/hg/makeDb/doc/ccgpAsmHub/ccgp.orderList.tsv +++ src/hg/makeDb/doc/ccgpAsmHub/ccgp.orderList.tsv @@ -1,14 +1,25 @@ -GCF_022079265.1_mLynRuf1.p bobcat (2022 UCLA) +GCA_019985065.2_ddArcGlau1.1p bigberry manzanita (GLNDR_RDG_Rd-6 2022) +GCA_019985075.1_ddArcGlau1.0.a bigberry manzanita (GLNDR_RDG_Rd-6 alternate hap 2021) +GCA_022045225.1_xgHalCrac1.a black abalone (W230 alternate hap 2022) +GCA_022045235.1_xgHalCrac1.p black abalone (W230 primary hap 2022) +GCA_022577435.1_fEmbJac1.0.p black perch (LCO1_2020_lvr primary hap 2022) +GCF_022079265.1_mLynRuf1.p bobcat (Redwood Valley CCGP_SWC_20201006 primary hap 2022) GCF_021869535.1_xbMytCali1.0.p California mussel (2022) -GCF_023055435.1_xgHalRufe1.0.p red abalone (2022 UCLA) -GCA_023333525.1_rAspTig1.0.p San Diegan tiger whiptail (HBS 135688 2022) -GCA_023333555.1_rAspTig1.0.a San Diegan tiger whiptail (alt pseudohaplotype HBS 135688 2022) -GCA_023349425.1_jaAntSola1.0.p starburst anemone (CCGP_MDBC_AS_20200803 2022) -GCA_023349385.1_jaAntSola1.0.a starburst anemone (alt pseudohaplotype CCGP_MDBC_AS_20200803 2022) -GCA_026230055.1_mCorTow1.0.hap1 Townsend's big-eared bat (haplotype 1 of 2 COTO_CA2020_CCGP 2022) -GCA_026230045.1_mCorTow1.0.hap2 Townsend's big-eared bat (haplotype 2 of 2 COTO_CA2020_CCGP 2022) -GCA_023053565.1_dmAquExim1.0.p Van Houtte's columbine (PFEx6 2022) -GCA_023053535.1_dmAquExim1.0.a Van Houtte's columbine (alt pseudohaplotype PFEx6 2022) -GCA_023053545.1_LEPA1.1 vernal pool tadpole shrimp (LEPA_1 2022) -GCA_023055335.1_fCliAna1.0.p woolly sculpin (CAN_PGR_092001 2022) -GCA_023055415.1_fCliAna1.0.a woolly sculpin (alt pseudohaplotype CAN_PGR_092001 2022) +GCA_023055725.1_bCalCai1.0.a California quail (MVZ:Bird:193975 alternate hap 2022) +GCA_023055505.1_bCalCai1.0.p California quail (MVZ:Bird:193975 primary hap 2022) +GCA_022086895.1_rActMar1.a Northwestern pond turtle (WTP2003 alternate hap 2022) +GCA_022086475.1_rActMar1.p Northwestern pond turtle (WTP2003 primary hap 2022) +GCF_023055435.1_xgHalRufe1.0.p red abalone (2022) +GCA_021963965.1_bArtBel1.0.p sage sparrow (canescens MVZ Bird 192114 primary hap 2022) +GCA_023333555.1_rAspTig1.0.a San Diegan tiger whiptail (HBS 135688 alternate hap 2022) +GCA_023333525.1_rAspTig1.0.p San Diegan tiger whiptail (HBS 135688 primary hap 2022) +GCA_022577445.1_bPasSan1.0.p Savannah sparrow (FMNH 499929 primary hap 2022) +GCA_023349385.1_jaAntSola1.0.a starburst anemone (CCGP_MDBC_AS_20200803 alternate hap 2022) +GCA_023349425.1_jaAntSola1.0.p starburst anemone (CCGP_MDBC_AS_20200803 primary hap 2022) +GCA_026230055.1_mCorTow1.0.hap1 Townsend's big-eared bat (COTO_CA2020_CCGP hap 1 of 2 2022) +GCA_026230045.1_mCorTow1.0.hap2 Townsend's big-eared bat (COTO_CA2020_CCGP hap 2 of 2 2022) +GCA_023053565.1_dmAquExim1.0.p Van Houtte's columbine (PFEx6 primary hap 2022) +GCA_023053535.1_dmAquExim1.0.a Van Houtte's columbine (alt alternate hap PFEx6 2022) +GCA_023053545.1_LEPA1.1 vernal pool tadpole shrimp L.packardi (LEPA_1 2022) +GCA_023055335.1_fCliAna1.0.p woolly sculpin (CAN_PGR_092001 primary hap 2022) +GCA_023055415.1_fCliAna1.0.a woolly sculpin (CAN_PGR_092001 alternate hap 2022)