54bfa01a40eae2477526f01136b15e3cc757126b hiram Sun Apr 2 21:56:49 2023 -0700 starting the taxId class list for CCGP assemblies refs #30912 diff --git src/hg/makeDb/doc/ccgpAsmHub/ccgp.taxId.asmId.class.txt src/hg/makeDb/doc/ccgpAsmHub/ccgp.taxId.asmId.class.txt new file mode 100644 index 0000000..84055ab --- /dev/null +++ src/hg/makeDb/doc/ccgpAsmHub/ccgp.taxId.asmId.class.txt @@ -0,0 +1,123 @@ +89197 GCA_019985065.2_ddArcGlau1.1p plants +89197 GCA_019985075.1_ddArcGlau1.0.a plants +198938 GCA_021963965.1_bArtBel1.0.p birds +198938 GCA_021966175.1_bArtBel1.0.a birds +6455 GCA_022045225.1_xgHalCrac1.a invertebrate +6455 GCA_022045235.1_xgHalCrac1.p invertebrate +335395 GCA_022086475.1_rActMar1.p reptiles +335395 GCA_022086895.1_rActMar1.a reptiles +100190 GCA_022577435.1_fEmbJac1.0.p fish +2916761 GCA_022577445.1_bPasSan1.0.p birds +94893 GCA_022577455.1_rAriEle1.0.p reptiles +2916761 GCA_022578375.1_bPasSan1.0.a birds +100190 GCA_022578405.1_fEmbJac1.0.a fish +94893 GCA_022578425.1_rAriEle1.0.a reptiles +650015 GCA_022605575.1_bLatJam1.0.p birds +156759 GCA_022605895.1_bRalLim1.0.a birds +650015 GCA_022605925.1_bLatJam1.0.a birds +156759 GCA_022605955.1_bRalLim1.0.p birds +62018 GCA_022747625.1_ioHetAmer1.0.a insects +62018 GCA_022747635.1_ioHetAmer1.0.p insects +241346 GCA_022749685.1_fSemPul1.0.p fish +44397 GCA_022749695.1_bMelMel1.0.p birds +241346 GCA_022749735.1_fSemPul1.0.a fish +44397 GCA_022749775.1_bMelMel1.0.a birds +1291435 GCA_023053535.1_dmAquExim1.0.a plants +63727 GCA_023053545.1_LEPA1.1 invertebrate +91573 GCA_023053555.1_BRLI_1.1 invertebrate +1291435 GCA_023053565.1_dmAquExim1.0.p plants +577405 GCA_023053575.1_BRLY_1.1 invertebrate +159646 GCA_023053635.1_rElgMul1.0.p reptiles +158812 GCA_023053665.1_rDiaPun1.0.a reptiles +159646 GCA_023053675.1_rElgMul1.0.a reptiles +158812 GCA_023053685.1_rDiaPun1.0.p reptiles +304258 GCA_023055335.1_fCliAna1.0.p fish +67830 GCA_023055345.1_dhQueWisl1.0.p plants +9191 GCA_023055355.1_bAgeTri1.0.p birds +9191 GCA_023055385.1_bAgeTri1.0.a birds +304258 GCA_023055415.1_fCliAna1.0.a fish +64432 GCA_023055425.1_ddLinParr1.0.p plants +67830 GCA_023055485.1_dhQueWisl1.0.a plants +2893758 GCA_023055505.1_bCalCai1.0.p birds +64432 GCA_023055565.1_ddLinParr1.0.a plants +2893758 GCA_023055725.1_bCalCai1.0.a birds +2917703 GCA_023333525.1_rAspTig1.0.p reptiles +2917703 GCA_023333555.1_rAspTig1.0.a reptiles +8519 GCA_023333635.1_rSceOcc1.0.a reptiles +8519 GCA_023333645.1_rSceOcc1.0.p reptiles +160748 GCA_023349385.1_jaAntSola1.0.a invertebrate +91212 GCA_023349395.1_dhJugCali1.0.p plants +160748 GCA_023349425.1_jaAntSola1.0.p invertebrate +271503 GCA_023349535.1_fCebVio1.0.a fish +91212 GCA_023349545.1_dhJugClai1.0.a plants +271503 GCA_023349555.1_fCebVio1.0.p fish +51858 GCA_023362775.1_rChaBot1.0.p reptiles +51858 GCA_023362785.1_rChaBot1.0.a reptiles +1485138 GCA_023634205.1_rActPal1.0.p reptiles +7611 GCA_023634235.1_eaPisBrev1.0.p invertebrate +7611 GCA_023634265.1_eaPisBrev1.0.a invertebrate +1485138 GCA_023634275.1_rActPal1.0.a reptiles +123631 GCA_024362935.1_bSetPet1.0.p birds +36612 GCA_024362995.1_drHetArbu1.0.p plants +36612 GCA_024363235.1_drHetArbu1.0.a plants +38669 GCA_024363435.1_mPerLon1.0.a mammals +38669 GCA_024363575.1_mPerLon1.0.p mammals +123631 GCA_024372515.1_bSetPet1.0.a birds +8741 GCA_024509115.1_rCroOre1.0.p reptiles +8741 GCA_024509165.1_rCroOre1.a reptiles +156854 GCA_024610695.1_qqTetVers1.0.a arachnid +156854 GCA_024610705.1_qqTetVers1.0.p arachnid +9643 GCA_024610735.1_mUrsAme1.0.p mammals +9643 GCA_024610745.1_mUrsAme1.0.a mammals +94247 GCA_024711525.1_mDipMer1.0.a mammals +94247 GCA_024711535.1_mDipMer1.0.p mammals +10013 GCA_024803745.1_mThoBot1.0.p mammals +10013 GCA_024803775.1_mThoBot1.0.a mammals +168615 GCA_025532165.1_iyCamVici1.0 insects +372063 GCA_026167925.1_mPerMan1.0.a mammals +114083 GCA_026167965.1_bCyaSte1.0.p birds +372482 GCA_026167975.1_rPhrBla1.0.hap2 reptiles +372482 GCA_026167985.1_rPhrBla1.0.hap1 reptiles +114083 GCA_026168045.1_bCyaSte1.0.a birds +245608 GCA_026170395.1_rPleGil1.0.hap1 reptiles +211600 GCA_026170545.1_bMelFor1.0.p birds +211600 GCA_026170555.1_bMelFor1.0.a birds +245608 GCA_026170595.1_rPleGil1.0.hap2 reptiles +372063 GCA_026229955.1_mPerMan1.0.p mammals +71755 GCA_026230005.1_fGilOrc1.0.hap1 fish +71755 GCA_026230025.1_fGilOrc1.0.hap2 fish +124745 GCA_026230045.1_mCorTow1.0.hap2 mammals +124745 GCA_026230055.1_mCorTow1.0.hap1 mammals +166745 GCA_026437355.1_fEucNew1.0.hap2 fish +166745 GCA_026437365.1_fEucNew1.0.hap1 fish +3694 GCA_028534865.1_ddPopTric1.0.hap2 plants +3694 GCA_028534895.1_ddPopTric1.0.hap1 plants +3438 GCA_028534965.1_dmUmbCali1.0.hap1 plants +60424 GCA_028535165.1_dhQueTome1.0.hap2 plants +60424 GCA_028535515.1_dhQueTome1.0.hap1 plants +1266315 GCA_028535815.1_dhQueBerb1.0.hap1 plants +1266315 GCA_028535905.1_dhQueBerb1.0.hap2 plants +159337 GCA_028536395.1_mMyoYum1.0.hap2 mammals +142466 GCA_028536645.1_bAphCal1.0.hap2 birds +142466 GCA_028536675.1_bAphCal1.0.hap1 birds +100895 GCA_028537755.1_mMicCal1.0.hap2 mammals +100895 GCA_028537955.1_mMicCal1.0.hap1 mammals +3438 GCA_028538565.1_dmUmbCali1.0.hap2 plants +159337 GCA_028538775.1_mMyoYum1.0.hap1 mammals +9696 GCA_028749965.1_mPumCon1.0.hap2 mammals +9696 GCA_028749985.1_mPumCon1.0.hap1 mammals +2713152 GCA_029207655.1_rThaSir1.0.hap2 reptiles +2713152 GCA_029207665.1_rThaSir1.0.hap1 reptiles +190680 GCA_029207755.1_bChaFas1.0.hap1 birds +190680 GCA_029207785.1_bChaFas1.0.hap2 birds +9716 GCA_029215605.1_mMirAng1.0.hap1 mammals +9716 GCA_029215635.1_mMirAng1.0.hap2 mammals +94852 GCA_029215655.1_rPitCat1.0.hap1 reptiles +94852 GCA_029215685.1_rPitCat1.0.hap2 reptiles +228670 GCA_029215705.1_aSpeHam1.0.hap1 amphibians +228670 GCA_029215755.1_aSpeHam1.0.hap2 amphibians +2202111 GCA_029215775.1_rAnnSte1.0.hap1 reptiles +2202111 GCA_029215795.1_rAnnSte1.0.hap2 reptiles +6549 GCF_021869535.1_xbMytCali1.0.p invertebrate +61384 GCF_022079265.1_mLynRuf1.p mammals +6454 GCF_023055435.1_xgHalRufe1.0.p invertebrate