c283cc94fbb268d9d9ec0989acace6308a25a665
hiram
  Mon Apr 17 21:11:53 2023 -0700
next version of Ensembl genes for HPRC genomes refs #30508

diff --git src/hg/utils/automation/asmHubTrackDb.sh src/hg/utils/automation/asmHubTrackDb.sh
index 3345310..3d52317 100755
--- src/hg/utils/automation/asmHubTrackDb.sh
+++ src/hg/utils/automation/asmHubTrackDb.sh
@@ -826,40 +826,41 @@
 else
   printf "# no ensGene found\n" 1>&2
 fi
 
 ###################################################################
 # Ensembl/ebiGene for HPRC project
 if [ -d ${buildDir}/trackData/ebiGene ]; then
  export ebiGeneBb=`ls ${buildDir}/trackData/ebiGene/*.bb 2> /dev/null || true | head -1`
  if [ -s "${ebiGeneBb}" ]; then
     export ebiGeneLink=`echo $ebiGeneBb | sed -e 's#.*trackData#../trackData#;'`
     printf "# link: $ebiGeneLink ${buildDir}/bbi/${asmId}.ebiGene.bb\n" 1>&2
     rm -f ${buildDir}/bbi/${asmId}.ebiGene.bb
     ln -s $ebiGeneLink ${buildDir}/bbi/${asmId}.ebiGene.bb
 
     printf "track ebiGene
-shortLabel Ensembl v2
-longLabel Ensembl annotation v2
+shortLabel Ensembl 2022_07
+longLabel Ensembl annotation 2022_07
 group genes
 visibility pack
 color 150,0,0
+itemRgb on
 type bigGenePred
 bigDataUrl bbi/%s.ebiGene.bb
-searchIndex name,name2,txId,geneName,parentTranscript
-labelFields name,name2,txId,geneName,parentTranscript
-defaultLabelFields name
+searchIndex name,name2,geneName
+labelFields name,name2,geneName
+defaultLabelFields geneName
 labelSeperator \" \"
 html html/%s.ebiGene\n\n" "${asmId}" "${asmId}"
 
 # $scriptDir/asmHubEnsGene.pl $asmId $buildDir/html/$asmId.names.tab $buildDir/bbi/$asmId > $buildDir/html/$asmId.ensGene.html "${ensVersion}"
  fi
 
 fi
 
 ###################################################################
 # hubLinks is for mouseStrains specific hub only
 export hubLinks="/hive/data/genomes/asmHubs/hubLinks"
 if [ -s ${hubLinks}/${asmId}/rnaSeqData/$asmId.trackDb.txt ]; then
   printf "include rnaSeqData/%s.trackDb.txt\n\n" "${asmId}"
 fi
 ##  for mouse strain hubs only