07c5c1d8d8dc3f88fbc8792278bd34e6cda9ef38 galt Mon Apr 24 16:11:35 2023 -0700 Contributed by user DailyDreaming on github. diff --git src/product/installer/browserSetup.sh src/product/installer/browserSetup.sh index adedaff..601a6b6 100644 --- src/product/installer/browserSetup.sh +++ src/product/installer/browserSetup.sh @@ -1731,30 +1731,31 @@ # these tracks are hidden by default hideTracks='intronEst cons100way cons46way ucscRetroAli5 mrna' stopMysql for db in $DBS; do echo2 Downloading Mysql files for mysql database $db $RSYNC $minRsyncOpt --exclude=* --progress -avp $RSYNCOPTS $HGDOWNLOAD::mysql/$db/ $MYSQLDIR/$db/ chown -R $MYSQLUSER:$MYSQLUSER $MYSQLDIR/$db done echo2 Copying hgFixed.trackVersion, required for most tracks $RSYNC --progress -avp $RSYNCOPTS $HGDOWNLOAD::mysql/hgFixed/trackVersion.* $MYSQLDIR/hgFixed/ echo2 Copying hgFixed.refLink, required for RefSeq tracks across all species $RSYNC --progress -avp $RSYNCOPTS $HGDOWNLOAD::mysql/hgFixed/refLink.* $MYSQLDIR/hgFixed/ + chown -R $MYSQLUSER:$MYSQLUSER $MYSQLDIR/hgFixed startMysql echo2 Hiding some tracks by default and removing some tracks from searches for db in $DBS; do echo $db for track in $hideTracks; do mysql $db -e 'UPDATE trackDb set visibility=0 WHERE tableName="'$track'"' done for track in $notSearchTables; do mysql $db -e 'DELETE from hgFindSpec WHERE searchTable="'$track'"' done done