3772c83b39f739b12b2b269fe06feb45ab549d9a
jcasper
  Sun Apr 30 01:11:28 2023 -0700
Installing updated hg.conf files from UCSC servers

diff --git confs/hgwdev.hg.conf confs/hgwdev.hg.conf
index 3829b09..53039b2 100644
--- confs/hgwdev.hg.conf
+++ confs/hgwdev.hg.conf
@@ -137,36 +137,36 @@
 #   Initial release of this function requires it to be turned on here.
 browser.indelOptions=on
 #
 # There are additional fonts available, not all are perfect.
 # Uncomment this to see extra font selections in the configure page
 # fonts.extra=yes
 
 # Turn this back on after people look at genome-test
 # browser.style=../style/genome-test.css
 
 #       add config option to let users personalize background and style
 #       of the browser. Setting is saved in the cart and can be set from
 #       the configure page.
 #       format is browser.theme.<name>=<stylesheet>[,<background>]
 #       background file is optional
-#browser.theme.default=theme-default.css
-browser.theme.classic=theme-classic.css
-browser.theme.sansSerif=theme-modern.css
-browser.theme.lightBlue=theme-lightBlue.css
-browser.theme.dark=theme-dark.css
-
+#browser.theme.Default=<>
+#browser.theme.Classic=theme-classic.css
+#browser.theme.Sans_Serif=theme-modern.css
+#browser.theme.Light_Blue=theme-lightBlue.css
+#browser.theme.Dark=theme-dark.css
+#
 # Change this default documentRoot if different in your installation,
 #	to allow some of the browser cgi binaries to find help text files
 browser.documentRoot=/usr/local/apache/htdocs
 
 # optional location of grepIndex files
 # braney commented out the following like on 8/29/2012 for testing purposes
 grepIndex.genbank=/data/tmp/grepIndex
 grepIndex.default=/gbdb
 
 #  new option for track reording functions, August 2006
 hgTracks.trackReordering=on
 
 # directory for temporary bbi file caching, default is /tmp/udcCache
 # see also: README.udc
 udc.cacheDir=../trash/udcCache
@@ -345,39 +345,39 @@
 # from trash/ while keeping saved session files safe in a different location.
 sessionDataDir=/data/apache/userdata/sessions
 sessionDataDirOld=/data/apache/userdata
 
 # Name prefix of 31 separate databases (one for each day of month, on same
 # server as customTrash, using customTracks.* profile) for custom track
 # database tables that belong to users' saved sessions, analogous to
 # sessionDataDir setting for saved session files.
 # The databases must be named as this prefix followed by {01, 02, 03, ... 31}.
 # For example, if the value is "customData" then the databases are named
 # customData01, customData02, ... customData31.
 sessionDataDbPrefix=customData
 
 # Allow the URL: /cgi-bin/hubApi to produce a WEB page
 # otherwise, it redirects to the help page
-hubApi.allowHtml=on
-
+# hubApi.allowHtml=on
 
 # Allow hgHubConnect to run the hubCheck command
 hgHubConnect.validateHub=on
 
 # Setting speeds up the browser by caching large trackDb (such as big hubs)
 #cacheTrackDbDir=../trash/trackDbCache
 cacheTrackDbDir=/dev/shm/trackDbCache
+#cacheTrackDbDir=
 
 # Recommended track sets refs #25601
 browser.recTrackSets=on
 #browser.recTrackSetsDetectChange=on
 
 ### Testing mouse over display function 2020-10 - Hiram
 #mouseOverEnabled=on
 
 # Enable hgPhyloPlace:
 hgPhyloPlaceEnabled=on
 nextstrainHost=https://nextstrain.org
 hgPhyloPlaceServerDir=/data/apache/userdata/hgPhyloPlace/genome-test
 
 # Enable svg based bar charts
 #svgBarChart=on
@@ -419,15 +419,21 @@
 curatedHubPrefix=alpha
 #canDupTracks=on
 ignoreDefaultKnown=on
 #hgTracksNoteHtml=<span style="color:blue"><b>Some text</b></span>
 
 canSnake=on
 
 # new GA4 key
 analyticsKey=G-P5EV0BL192
 
 # show the hgTracks download track data in window interface popup
 showDownloadUi=on
 
 # allows merging of carts - needed so that recommended track sets do not overwrite your own custom data #28525. Note to delete in future as we want this default
 mergeRecommended=on
+
+# show a tutorial on hgTracks to new users
+showTutorial=on
+
+warnSeconds=20
+showEarlyErrors=on