5c2aaf5c9e5cce3360e476917f7b8e09dc510b39
braney
Fri May 26 10:51:05 2023 -0700
skip hub prefix on link to hgdownload for GTF files
diff --git src/hg/hgTables/mainPage.c src/hg/hgTables/mainPage.c
index 43268ee..817972e 100644
--- src/hg/hgTables/mainPage.c
+++ src/hg/hgTables/mainPage.c
@@ -382,31 +382,31 @@
hPrintf(" \n", ot->label);
}
hPrintf("\n");
hPrintf(" ");
hPrintf("
"
"Note: Table Browser GTF files contain transcripts, but no gene identifiers or symbols. "
"If you are looking for fully formatted "
"gene model files for use in genome analysis pipelines, check the "
"bigZips/genes "
- "directory on our download server.
", database);
+ "directory on our download server.", trackHubSkipHubName(database));
hPrintf("
"
"Signal data points format: The Table Browser outputs signal track data in "
"wiggle format by default. You can also use the "
"Table Browser filter feature to designate a value threshold and then output that as BED format. The "
"Table Browser will then create a BED file with an entry for every value that passes the filter. Our command line tool "
"bigWigToBedGraph can also be used "
"to convert wig files directly. Contact us at genome@soe.ucsc.edu for help with data extraction or conversion.
");
hPrintf(" ");
// we should make an hgTables.js one day, this is ugly
jsInline("function checkOutputNotes(event) {\n"
"var outType=document.getElementById('outputTypeDropdown').value;\n"
"if (outType==='gff')\n"
" document.getElementById('gffNote').style.display='';\n"
"else if (outType==='wigData')\n"