2f86bf00b7eff014176677a0bfb4fdaaf9ad842f
angie
  Thu Jun 22 10:17:15 2023 -0700
Added recombinant spotted by @aviczhl2 in sars-cov-2-variants/lineage-proposals#174

diff --git src/hg/utils/otto/sarscov2phylo/includeRecombinants.tsv src/hg/utils/otto/sarscov2phylo/includeRecombinants.tsv
index 8fd4df0..f0a7db2 100644
--- src/hg/utils/otto/sarscov2phylo/includeRecombinants.tsv
+++ src/hg/utils/otto/sarscov2phylo/includeRecombinants.tsv
@@ -1,16 +1,16 @@
-ID	pango-designation issue number or comment	lineage
+ID	pango-designation or lineage-proposals issue number or comment	lineage
 England/ALDP-2F86D33/2021	422	
 England/QEUH-312A66E/2022	422	
 England/ALDP-31AE19E/2022	422	
 England/ALDP-325CFB2/2022	422	
 OV626513.1	422	
 OV628319.1	422	
 OV720067.1	422	
 OV721520.1	422	
 EPI_ISL_8166781	422	
 EPI_ISL_8610834	422	
 EPI_ISL_8865709	422	
 EPI_ISL_8898412	422	
 EPI_ISL_8438332	437	
 EPI_ISL_10262189	437	
 EPI_ISL_10263151	437	
@@ -1647,15 +1647,29 @@
 EPI_ISL_16619552	1637	
 EPI_ISL_16654445	1637	
 EPI_ISL_16654446	1637	
 EPI_ISL_16654447	1637	
 EPI_ISL_16654448	1637	
 EPI_ISL_16657063	1637	
 EPI_ISL_16657064	1637	
 EPI_ISL_16663257	1637	
 EPI_ISL_16670172	1637	
 EPI_ISL_16679111	1637	
 EPI_ISL_16690171	1637	
 EPI_ISL_16703822	1637	
 EPI_ISL_16735084	1637	
 EPI_ISL_16738930	1637	
 EPI_ISL_16818068	1637	
+EPI_ISL_17592173	174	
+EPI_ISL_17592174	174	
+EPI_ISL_17592175	174	
+EPI_ISL_17592179	174	
+EPI_ISL_17592180	174	
+EPI_ISL_17592201	174	
+EPI_ISL_17592203	174	
+C_AA002585.1	174	
+C_AA002586.1	174	
+C_AA002587.1	174	
+C_AA002591.1	174	
+C_AA002592.1	174	
+C_AA002581.1	174	
+C_AA002579.1	174