c41c17e6c7251f5f93f68ad8e80ab6b0d0f348f6 markd Mon Jul 10 15:56:23 2023 -0700 fixed SEGV with checking certain invalid GFF3s diff --git src/lib/tests/expected/gff3ErrorCasesTest.err src/lib/tests/expected/gff3ErrorCasesTest.err index a1560c6..6c34edf 100644 --- src/lib/tests/expected/gff3ErrorCasesTest.err +++ src/lib/tests/expected/gff3ErrorCasesTest.err @@ -1,4 +1,6 @@ input/errorCasesTest.gff3:28: expected Target attribute in the form "target_id start end [strand]", got "CG41424-RA AABU01002023_1064-818 22000976 22001221 +" +Annotation records for discontinuous features with ID="DMG5-chr2RHet.4.001.a" must have one and only one parent Annotation records for discontinuous features with ID="DMG5-chr2RHet.4.001.a" do not have the same type, found "gene" and "mRNA" +Incorrect duplicated ID="DMG5-chr2RHet.4.001.a" or attempt to create discontinuous features for type "gene" Can't find annotation record "DMG5-chr2RHet.4.001" referenced by "DMG5-chr2RHet.4.001.a" Parent attribute -GFF3: 3 parser errors +GFF3: 5 parser errors