b1b821e937a458752f9073cec46cebddfbb1b58b
markd
  Wed Jul 19 11:06:58 2023 -0700
import of gencode VM33 final release

diff --git src/hg/makeDb/doc/mm39/gencode.txt src/hg/makeDb/doc/mm39/gencode.txt
index 77f1fe4..08f1e74 100644
--- src/hg/makeDb/doc/mm39/gencode.txt
+++ src/hg/makeDb/doc/mm39/gencode.txt
@@ -334,42 +334,46 @@
 
     # edit all.joiner to add ~/tmp/gencodeVM32/hgcImport.joiner
     # verify with:
     pushd /hive/data/genomes/mm39/bed/gencodeVM32/hgcImport
     make  -f ~/kent/src/hg/makeDb/outside/gencode/gencodeLoad.mk joinerCheck
 
     # check tracks in browser sandbox
     # commit all
     jkmake DBS=mm39 alpha
 ##############################################################################
 2023-04-25: import of UCSC GENCODE group processing of GENCODE VM33 pre-release (markd)
 
     # edit hg/makeDb/outside/gencode/gencodeLoad.mk to set release and ensembl versions
     pre="Pre"
 
+2023-04-25: import of UCSC GENCODE group processing of GENCODE VM33 final release (markd)
+    # edit hg/makeDb/outside/gencode/gencodeLoad.mk to set release and ensembl versions
+    pre=""
+
     # download, build and load tables
     mkdir -p /hive/data/genomes/mm39/bed/gencodeVM33/hgcImport${pre}
     pushd /hive/data/genomes/mm39/bed/gencodeVM33/hgcImport${pre}
 
     (time nice make -j 10 -f ~/kent/src/hg/makeDb/outside/gencode/gencodeLoad.mk) >&build.1.out&
 
     # compare tables from previous release to see if number changed makes
     # sense.  Results are in gencode-cmp.tsv
 
     # generate trackDb and joiner blurb
     pushd ~/kent/src/hg/makeDb/trackDb
-    ../../makeDb/outside/gencode/bin/gencodeGenerateTrackDbs mm39 M33 110 'May 2023'
+    ../../makeDb/outside/gencode/bin/gencodeGenerateTrackDbs mm39 M33 110 'July 2023'
 
     # edit mouse/mm39/trackDb.gencode.ra to add new .ra file include
     jkmake DBS=mm39
 
     ## only if being pushed to RR:
     # Update 'Release Notes' in
     # mouse/mm39/wgEncodeGencodeSuper.html
 
     # edit all.joiner to add ~/tmp/gencodeVM33/hgcImport${pre}.joiner
     # verify with:
     pushd /hive/data/genomes/mm39/bed/gencodeVM33/hgcImport${pre}
     make  -f ~/kent/src/hg/makeDb/outside/gencode/gencodeLoad.mk joinerCheck
 
     # check tracks in browser sandbox
     # commit all