8032b3fdf26b7de0f295588f47265207c0e41520
angie
  Fri Sep 15 10:40:41 2023 -0700
Include MicrobeTrace subtree links in results table.

diff --git src/hg/hgPhyloPlace/phyloPlace.h src/hg/hgPhyloPlace/phyloPlace.h
index 67e3be3..001dedf 100644
--- src/hg/hgPhyloPlace/phyloPlace.h
+++ src/hg/hgPhyloPlace/phyloPlace.h
@@ -18,30 +18,32 @@
 // Allow users to upload a lot of sequences, but put limits on how much detail we'll show and
 // how many custom tracks we'll create.
 #define MAX_SUBTREE_SIZE 5000
 #define MAX_MICROBETRACE_SUBTREE_SIZE 500
 #define MAX_SUBTREE_BUTTONS 5
 #define MAX_SEQ_DETAILS 1000
 #define MAX_SUBTREE_CTS 10
 
 // For usher's -K option (single subtree):
 #define SINGLE_SUBTREE_SIZE "2000"
 #define USHER_NUM_THREADS "16"
 #define USHER_SERVER_CHILD_TIMEOUT "600"
 #define USHER_DEDUP_PREFIX "uploaded_"
 
 #define NEXTSTRAIN_DRAG_DROP_DOC "https://docs.nextstrain.org/projects/auspice/en/latest/advanced-functionality/drag-drop-csv-tsv.html"
+#define NEXTSTRAIN_URL_PARAMS "?f_userOrOld=uploaded%20sample"
+#define MICROBETRACE_URL_PARAMS ""
 #define OUTBREAK_INFO_URLBASE "https://outbreak.info/situation-reports?pango="
 #define PANGO_DESIGNATION_ISSUE_URLBASE "https://github.com/cov-lineages/pango-designation/issues/"
 
 // usher now preprends "node_" to node numbers when parsing protobuf, although they're still stored
 // numeric in the protobuf.
 #define USHER_NODE_PREFIX "node_"
 
 struct treeChoices
 /* Phylogenetic tree versions for the user to choose from. */
 {
     char **protobufFiles;      // Mutation annotated tree files in protobuf format for UShER
     char **metadataFiles;      // Sample metadata a la GISAID's nextmeta download option
     char **sources;            // GISAID or public
     char **descriptions;       // Menu labels to describe the options to the user
     char **aliasFiles;         // Two-column files associating IDs/aliases with full tree names