dd6685988d7600e805dcf71b943d806dd10289cf braney Sat Sep 30 17:05:23 2023 -0700 relax the constraint on sorting for bedToBigBed and bedGraphToBigWig. diff --git src/utils/bedGraphToBigWig/bedGraphToBigWig.c src/utils/bedGraphToBigWig/bedGraphToBigWig.c index 0474881..94d8cdc 100644 --- src/utils/bedGraphToBigWig/bedGraphToBigWig.c +++ src/utils/bedGraphToBigWig/bedGraphToBigWig.c @@ -9,32 +9,33 @@ #include "localmem.h" #include "hash.h" #include "options.h" #include "sqlNum.h" #include "dystring.h" #include "cirTree.h" #include "sig.h" #include "zlibFace.h" #include "bPlusTree.h" #include "bbiFile.h" #include "bwgInternal.h" #include "bigWig.h" #include "portable.h" -char *version = "2.9"; // when changing, change in bedToBigBed, bedGraphToBigWig, and wigToBigWig +char *version = "2.10"; // when changing, change in bedToBigBed, bedGraphToBigWig, and wigToBigWig /* Version history from 2.8 on at least - + * 2.10 - allow chromsomes to be in non-lexicographic order * 2.9 - ability to specify chromAlias bigBed as chromSizes file * 2.8 sync up version numbers with bedToBigBed */ static int blockSize = 256; static int itemsPerSlot = 1024; static boolean doCompress = FALSE; static int maxGigs = 100; // Maximum number of gigs to allocate in one block. // Undocumented on purpose. static boolean sizesIsBb = FALSE; void usage() /* Explain usage and exit. */ {