9db1c1b33a7d1db0f06783b71f81ed96a87ecb76 hiram Fri Oct 27 15:01:53 2023 -0700 VGP update to catch up with current listings refs #25555 diff --git src/hg/makeDb/doc/vgpAsmHub/vgp.taxId.asmId.class.txt src/hg/makeDb/doc/vgpAsmHub/vgp.taxId.asmId.class.txt index 8e29778..f27cbad 100644 --- src/hg/makeDb/doc/vgpAsmHub/vgp.taxId.asmId.class.txt +++ src/hg/makeDb/doc/vgpAsmHub/vgp.taxId.asmId.class.txt @@ -19,30 +19,31 @@ 61383 GCA_007474575.2_mLynCan4.alt.v2 mammals 28689 GCA_008658355.1_bAlcTor1_alternate birds 28689 GCA_008658365.1_bAlcTor1_primary birds 9771 GCA_008658375.1_mBalMus1_alternate mammals 9771 GCA_008658375.2_mBalMus1.alt.v2 mammals 42100 GCA_008692045.1_mPhoSin1.alt mammals 59729 GCA_008822115.3_bTaeGut2.mat.v3 birds 59729 GCA_008822125.1_bTaeGut2pat birds 1196302 GCA_009651025.1_bCorMon1.alt birds 9704 GCA_009762295.1_mZalCal1.alt mammals 9704 GCA_009762295.2_mZalCal1.alt.v2 mammals 9704 GCA_009762305.1_mZalCal1.pri mammals 1203425 GCA_009762535.1_fNotCel1.pri fish 1203425 GCA_009762545.1_fNotCel1.alt fish 27794 GCA_009762595.1_rDerCor1.alt reptiles +27794 GCA_009762595.2_rDerCor1.alt.v2 reptiles 685728 GCA_009764475.1_sPriPec2.pri sharks 685728 GCA_009764485.1_sPriPec2.alt sharks 121530 GCA_009764505.1_bTauEry1.alt birds 135433 GCA_009764545.1_bGeoTri1.alt birds 27794 GCA_009764565.1_rDerCor1.pri reptiles 135433 GCA_009764595.1_bGeoTri1.pri birds 121530 GCA_009769465.1_bTauEry1.pri birds 8869 GCA_009769485.1_bCygOlo1.alt birds 8869 GCA_009769485.2_bCygOlo1.alt.v2 birds 240206 GCA_009769505.1_bPteGut1.alt birds 8103 GCA_009769515.1_fCycLum1.alt fish 240206 GCA_009769525.1_bPteGut1.pri birds 8103 GCA_009769545.1_fCycLum1.pri fish 153643 GCA_009769595.1_bBucAby1.alt birds 153643 GCA_009769605.1_bBucAby1.pri birds @@ -68,90 +69,95 @@ 409849 GCA_009829135.1_fPerMag1.alt fish 36723 GCA_009829165.1_mMusErm1.alt mammals 296741 GCA_009829205.1_bChiLan1.alt birds 59729 GCA_009859025.1_bTaeGut2.p.v1.alt birds 59729 GCA_009859065.2_bTaeGut2.pri.v2 birds 9771 GCA_009873245.2_mBalMus1.v2 mammals 386614 GCA_010909745.1_sAmbRad1.alt sharks 386614 GCA_010909765.1_sAmbRad1.pri sharks 7757 GCA_010993595.1_kPetMar1.alt otherChordates 8010 GCA_011004835.1_fEsoLuc1.alt fish 8010 GCA_011004845.1_fEsoLuc1.pri fish 100784 GCA_011004865.1_bBalReg1.alt birds 100784 GCA_011004875.1_bBalReg1.pri birds 9483 GCA_011078405.1_mCalJac1.mat primates 9483 GCA_011100535.1_mCalJac1.pat primates +9483 GCA_011100535.2_mCalJac1.2.pat mammals 9483 GCA_011100555.1_mCalJac1.pat.X primates 9337 GCA_011100635.1_mTriVul1.pri mammals 9337 GCA_011100645.1_mTriVul1.alt mammals 61156 GCA_011750645.1_mArvNil1.mat mammals 61156 GCA_011762505.1_mArvNil1.pat.X mammals 9739 GCA_011762515.1_mTurTru1.pat mammals 9739 GCA_011762535.1_mTurTru1.mat mammals 61156 GCA_011762545.1_mArvNil1.pat mammals 9739 GCA_011762595.1_mTurTru1.mat.Y mammals 13146 GCA_012275265.1_bMelUnd1.mat birds 13146 GCA_012275275.1_bMelUnd1.pat birds 13146 GCA_012275295.1_bMelUnd1.mat.Z birds 882753 GCA_013347815.1_fAntMac1.alt fish 8005 GCA_013347915.1_fEleEle1.alt fish 882753 GCA_013358685.1_fAntMac1.pri fish +118141 GCA_013368575.1_fMegCyp1.alt fish 48427 GCA_013368595.1_bNycGra1.alt birds 48427 GCA_013368605.1_bNycGra1.pri birds 59479 GCA_014108255.1_mRhiFer1.p mammals 129108 GCA_014839645.1_fXenCan1.alt fish 195821 GCA_014839685.1_fAnaAna1.pri fish 195821 GCA_014839705.1_fAnaAna1.alt fish 73324 GCA_014839755.1_bSylBor1.pri birds 73324 GCA_014839765.1_bSylBor1.alt birds 118200 GCA_014839825.1_bDryPub1.alt birds 118200 GCA_014839835.1_bDryPub1.pri birds 129108 GCA_014839995.1_fXenCan1.pri fish 42514 GCA_015220065.1_fPygNat1.alt fish 72105 GCA_015220095.1_fSebUmb1.alt fish 120794 GCA_015220155.1_bFalRus1.alt birds 488313 GCA_015220175.1_bPogPus1.alt birds +8469 GCA_015220195.2_rCheMyd1.alt.v2 reptiles 27675 GCA_015220265.1_mChoDid1.alt mammals 488313 GCA_015220805.1_bPogPus1.pri birds 43150 GCA_015227805.3_bHirRus1.pri.v3 birds 43150 GCA_015227815.3_bHirRus1.alt.v3 birds 10116 GCA_015244455.1_mRatBN7.1_alternate_haplotype mammals 9261 GCA_015852515.1_mTacAcu1.alt mammals 8790 GCA_016128335.1_ZJU1.0 birds 8790 GCA_016128335.2_ZJU2.0 birds 9606 GCA_016695395.2_mHomSap3.mat mammals 9606 GCA_016700455.2_mHomSap3.pat mammals 57068 GCA_016880875.1_bAcaChl1.alt birds 57068 GCA_016904835.1_bAcaChl1.pri birds +13397 GCA_017639455.1_sCarCar2.alt sharks 670352 GCA_017639475.1_bPluApr1.alt birds 670352 GCA_017639485.1_bPluApr1.pri birds 52777 GCA_017639555.1_bCicMag1.pri birds 148594 GCA_017639645.1_bFalNau1.mat birds 52777 GCA_017639665.1_bCicMag1.alt birds 946358 GCA_017639675.1_fAplTae1.pri fish 946358 GCA_017639685.1_fAplTae1.alt fish 1250792 GCA_017639755.1_fMelBoe1.alt fish 941984 GCA_017976295.1_fToxJac2.alt fish 55661 GCA_017976305.1_bCucCan1.alt birds 109905 GCA_017976315.1_fCheRos1.alt fish 55661 GCA_017976375.1_bCucCan1.pri birds 34773 GCA_018492705.1_fAloSap1.alt fish 33562 GCA_019395325.1_mDroGli1.alt mammals 75038 GCA_020382915.1_fScaArg1.alt fish 390368 GCA_020510965.1_fPhoLeu1.alt fish 390368 GCA_020510985.1_fPhoLeu1.pri fish 8895 GCA_020740585.1_bApuApu2.alt.cur birds +9447 GCA_020740595.1_mLemCat1.alt mammals 134902 GCA_020740675.1_bCorHaw1.alt.cur birds 51337 GCA_020740715.1_mJacJac1.pat.decon mammals 8895 GCA_020740795.1_bApuApu2.pri.cur birds 34787 GCA_020745675.1_fTauAds1.alt.cur fish 34787 GCA_020745685.1_fTauAds1.pri.cur fish 243314 GCA_020745695.1_bHemCom1.alt.cur birds 243314 GCA_020745705.1_bHemCom1.pri.cur birds 170820 GCA_020745735.1_sHemOce1.pat.X.cur. sharks 170820 GCA_020745765.1_sHemOce1.mat.decon sharks 1118847 GCA_020745775.1_bTheCae1.pri.cur birds 1118847 GCA_020745805.1_bTheCae1.alt.cur birds 297711 GCA_020746095.1_bTroSur1.alt.cur birds 297711 GCA_020746105.1_bTroSur1.pri.cur birds 439704 GCA_020800305.1_bPorHoc1.mat.Z.cur birds 439704 GCA_020801775.1_bPorHoc1.pat.decon birds @@ -159,160 +165,329 @@ 77932 GCA_020826845.1_mDicBic1.mat.cur mammals 64668 GCA_023344045.1_bLagMut1_alternate birds 345164 GCA_023634085.1_bFalChe1.pri birds 345164 GCA_023634115.1_bFalChe1.alt birds 8954 GCA_023634155.1_bFalPer1.pri birds 8954 GCA_023634185.1_bFalPer1.alt birds 345155 GCA_023634305.1_bFalBia1.alt birds 46513 GCA_023637925.1_DD_ASM_B1a birds 46513 GCA_023637945.1_DD_ASM_B1 birds 345155 GCA_023638135.1_bFalBia1.pri birds 48850 GCA_023851605.1_mTamTet1.pri mammals 48850 GCA_023853755.1_mTamTet1.alt mammals 109475 GCA_024140225.1_mSunEtr1.alt.cur mammals 99487 GCA_024166345.1_mEleMax1_alternate_haplotype mammals 246179 GCA_024294585.1_rVipLat1.pri reptiles +246179 GCA_024294605.1_rVipLat1.alt reptiles 48708 GCA_025094165.1_mMesDen1_alternate_haplotype mammals 286002 GCA_025201965.1_rGopFla2.pat.asm reptiles 48708 GCA_025265405.1_mMesDen1_primary_haplotype mammals 202280 GCA_026419925.1_bHarHar1 birds 27615 GCA_026419965.1_mKogBre1_haplotype_1 mammals 27615 GCA_026419985.1_mKogBre1_haplotype_2 mammals 81927 GCA_026979555.1_bVidCha1_purged_dups_haplotype birds 81927 GCA_026979565.1_bVidCha1_merged_haplotype birds +65483 GCA_027172095.1_rPodRaf1.alt reptiles +233779 GCA_027382365.2_aSpeBom1.2.alt amphibians 310915 GCA_027382375.1_fPanHyp1.alt fish +9470 GCA_027406535.1_mNycCou1.alt mammals 30427 GCA_027406555.1_bHaeMex1.alt birds 9031 GCA_027408205.1_bGalGal5.alt birds 9031 GCA_027408225.1_bGalGal5.pri birds 9031 GCA_027408255.1_bGalGal4.alt birds 110931 GCA_027409165.1_mCynVol1.alt mammals +110931 GCA_027409185.1_mCynVol1.pri mammals 13676 GCA_027409835.1_fScoJap1.alt fish +8351 GCA_027410445.1_aDisPic1.pri amphibians +8351 GCA_027410455.1_aDisPic1.alt amphibians 9240 GCA_027474245.1_bSphHub1.pri birds 9240 GCA_027474345.1_bSphHub1.alt birds 30427 GCA_027477595.1_bHaeMex1.pri birds 9031 GCA_027557775.1_bGalGal4.pri birds 279927 GCA_027559525.1_bAcrTri1.alt birds 279927 GCA_027559615.1_bAcrTri1.pri birds 54386 GCA_027574665.1_bRhyJub1.pri birds +8345 GCA_027579415.1_aBomBom1.alt amphibians 2857394 GCA_027579445.1_bAmmNel1.pri birds 2857394 GCA_027579665.1_bAmmNel1.alt birds 443677 GCA_027579695.1_fNeoGra1.pri fish 443677 GCA_027579805.1_fNeoGra1.alt fish 54386 GCA_027595965.1_bRhyJub1.alt birds +42254 GCA_027595995.1_mSorAra2.alt mammals +150705 GCA_027789725.1_aDenEbr1.mat amphibians +150705 GCA_027789765.1_aDenEbr1.pat amphibians 69262 GCA_027887135.1_bAmmCau1.alt birds 69262 GCA_027887145.1_bAmmCau1.pri birds +2991368 GCA_027887205.1_rMalTer1.hap2 reptiles 13616 GCA_027917375.1_mMonDom1.alt mammals +8429 GCA_027917415.1_aGasCar1.hap2 amphibians +8429 GCA_027917425.1_aGasCar1.pri amphibians 219752 GCA_027942865.1_fOdoBon6.hap1 fish 219752 GCA_027942885.1_fOdoBon6.hap2 fish 33610 GCA_028017155.1_bGypBar2.alt birds +2746895 GCA_028017805.1_mBalRic1.hap1 mammals +82168 GCA_028017835.1_rEmyOrb1.hap1 reptiles +82168 GCA_028017845.1_rEmyOrb1.hap2 reptiles +61452 GCA_028018655.1_mNeoNeb1.alt mammals 44398 GCA_028018845.1_bMelGeo1.pri birds 44398 GCA_028019105.1_bMelGeo1.alt birds 8905 GCA_028020675.1_bPodStr1.alt birds 8905 GCA_028020825.1_bPodStr1.pri birds +9764 GCA_028021215.1_mEscRob2.pri mammals +9764 GCA_028021475.1_mEscRob2.alt mammals 1772091 GCA_028021495.1_fLycPai1.hap1 fish 1772091 GCA_028022725.1_fLycPai1.hap2 fish 33610 GCA_028022735.1_bGypBar2.pri birds +2746895 GCA_028023285.1_mBalRic1.hap2 mammals +9315 GCA_028372415.1_mMacEug1.pri mammals 8795 GCA_028389875.1_bPtePen1.pri birds 8795 GCA_028389885.1_bPtePen1.alt birds +9315 GCA_028389975.1_mMacEug1.alt mammals +34844 GCA_028451465.1_mEreDor1.pri mammals 75485 GCA_028500815.1_bRisTri1.patW.cur.20221130 birds +34844 GCA_028500835.1_mEreDor1.alt mammals 75485 GCA_028501385.1_bRisTri1.mat.cur.20221130 birds +27606 GCA_028564815.1_mEubGla1.hap2 mammals +77598 GCA_028571665.1_mHetBru1.alt mammals +77598 GCA_028571685.1_mHetBru1.pri mammals +9226 GCA_028858555.1_bAraAra1.hap2 birds +9117 GCA_028858595.1_bGruAme1.pat birds +57412 GCA_028858625.1_bColStr4.hap2 birds +57412 GCA_028858725.1_bColStr4.hap1 birds +9226 GCA_028858755.1_bAraAra1.hap1 birds +327740 GCA_029493135.1_aHylSar1.hap2 amphibians +2546036 GCA_029633845.1_fLamInc1.hap1 fish +27720 GCA_029633855.1_fHopMal1.hap1 fish +27720 GCA_029633875.1_fHopMal1.hap2 fish +460621 GCA_029931755.1_rEulEur1.hap2 reptiles +9785 GCA_030014295.1_mLoxAfr1.hap2 mammals +2290929 GCA_030014385.1_fTriRos1.hap1 fish +2290929 GCA_030015355.1_fTriRos1.hap2 fish +94835 GCA_030020295.1_rGavGan2.hap2 reptiles +9785 GCA_030020305.1_mLoxAfr1.hap1 mammals +94835 GCA_030020385.1_rGavGan2.hap1 reptiles +143292 GCA_030020945.1_mManPen7.hap2 mammals +29137 GCA_030020955.1_mDugDug1.hap2 mammals +575201 GCA_030028035.1_mHipAmp2.hap1 mammals +29137 GCA_030035585.1_mDugDug1.hap1 mammals +261503 GCA_030035675.1_rRhiFlo1.hap2 reptiles +1983395 GCA_030035685.1_sMobBir1.hap2 sharks +261503 GCA_030035715.1_rRhiFlo1.hap1 reptiles +79690 GCA_030144785.1_sHypSab1.hap2 sharks +79690 GCA_030144855.1_sHypSab1.hap1 sharks +118683 GCA_030412085.1_rCycPin1.hap2 reptiles +118683 GCA_030412105.1_rCycPin1.hap1 reptiles +9978 GCA_030435715.1_mOchPri1.hap2 mammals +9666 GCA_030435785.1_mMusLut2.alt mammals +9361 GCA_030445055.1_mDasNov1.hap1 mammals +930266 GCA_030448965.1_fSalBra1.hap1 fish +36300 GCA_030449815.1_bPelCri1.alt birds +930266 GCA_030463535.1_fSalBra1.hap2 fish +36300 GCA_030463565.1_bPelCri1.pri birds +48891 GCA_030490855.1_bPoeAtr1.hap2 birds +3053191 GCA_030684295.1_sSteTig4.hap2 sharks +8496 GCA_030867065.1_rAllMis1 reptiles +283338 GCA_030867085.1_rLiaOli1.hap2 reptiles +283338 GCA_030867105.1_rLiaOli1.hap1 reptiles +30419 GCA_030867145.1_bOpiHoa1.hap1 birds +30419 GCA_030867165.1_bOpiHoa1.hap2 birds +37040 GCA_030936125.1_bGavSte3.hap1 birds +37040 GCA_030936135.1_bGavSte3.hap2 birds +121349 GCA_031001685.1_rEryReg1.hap3 reptiles +121349 GCA_031021085.1_rEryReg1.hap2 reptiles +121349 GCA_031021105.1_rEryReg1.hap1 reptiles +37578 GCA_031468805.1_bMorBas2.hap1 birds +37578 GCA_031468815.1_bMorBas2.hap2 birds 8154 GCA_900246225.5_fAstCal1.3 fish 64144 GCA_900324465.2_fAnaTes1.2 fish 64144 GCA_900324465.3_fAnaTes1.3 fish 205130 GCA_900324485.3_fMasArm1.3 fish 56716 GCA_900634415.1_fCotGob3.1 fish 56716 GCA_900634435.1_fCotGob3.1_alternate_haplotype fish 210632 GCA_900634625.2_fParRan2.2 fish 441366 GCA_900634775.1_fGouWil2.1 fish 441366 GCA_900634775.2_fGouWil2.2 fish 64144 GCA_900650485.1_fAnaTes1.2_alternate_haplotype fish 441366 GCA_900650505.1_fGouWil2.1_alternate_haplotype fish 210632 GCA_900651595.1_fParRan2.1_alternate_haplotype fish 158456 GCA_900651605.1_fBetSpl5.1_alternate_haplotype fish +158456 GCA_900651605.2_fBetSpl5.4_alternate_haplotype fish 299321 GCA_900700345.2_fDenClu1.1_alternate_haplotype fish 299321 GCA_900700375.2_fDenClu1.2 fish 205130 GCA_900700395.1_fMasArm1.2_alternate_haplotype fish 27687 GCA_900700845.2_fErpCal1.1_alternate_haplotype fish +27687 GCA_900700845.3_fErpCal1.3_alternate_haplotype fish 8175 GCA_900880675.2_fSpaAur1.2 fish 8175 GCA_900880695.1_fSpaAur1.1_alternate_haplotype fish 173247 GCA_900963305.2_fEcheNa1.2 fish 173247 GCA_900963505.1_fEcheNa1.1_alternate_haplotype fish 113540 GCA_900964985.2_fSclFor1.1_alternate_haplotype fish 31033 GCA_901000725.3_fTakRub1.3 fish 31033 GCA_901000745.3_fTakRub1.2_alternate_haplotype fish +194408 GCA_901001135.2_aRhiBiv1.2 amphibians 8032 GCA_901001165.2_fSalTru1.2 fish 194408 GCA_901001175.1_aRhiBiv1.1_alternate_haplotype amphibians 177155 GCA_901699155.1_bStrTur1.1 birds 177155 GCA_901699155.2_bStrTur1.2 birds 177155 GCA_901699165.1_bStrTur1.1_alternate_haplotype birds 177155 GCA_901699165.2_bStrTur1.2_alternate_haplotype birds 161584 GCA_901709675.1_fSynAcu1.1 fish 161584 GCA_901709685.1_fSynAcu1.1_alternate_haplotype fish +1415580 GCA_901765095.2_aMicUni1.2 amphibians 1415580 GCA_901765105.1_aMicUni1.1_alternate_haplotype amphibians 586833 GCA_902148815.1_fMyrMur1.1_alternate_haplotype fish 375764 GCA_902148825.1_fSphaOr1.1_alternate_haplotype fish 181472 GCA_902148835.1_fSalaFa1.1_alternate_haplotype fish 223781 GCA_902153765.1_bAquChr1.2_alternate_haplotype birds 223781 GCA_902153765.2_bAquChr1.4_alternate_haplotype birds 8049 GCA_902167395.1_gadMor3.0_alternate_haplotype fish 29144 GCA_902362175.1_fChaCha1.1_alternate_haplotype fish 7604 GCA_902459445.1_eAstRub1.2_alternate_haplotype echinoderm 260995 GCA_902459495.1_aGeoSer1.1_alternate_haplotype amphibians 260995 GCA_902459505.1_aGeoSer1.1 amphibians +260995 GCA_902459505.2_aGeoSer1.2 amphibians 390379 GCA_902500245.1_fThaAma1.1_alternate_haplotype fish 390379 GCA_902500255.1_fThaAma1.1 fish +9657 GCA_902653095.1_mLutLut1.1_alternate_haplotype mammals +30640 GCA_902685475.1_mSciCar1.1_alternate_haplotype mammals 55149 GCA_902685485.1_mSciVul1.1_alternate_haplotype mammals 55149 GCA_902686455.1_mSciVul1.1 mammals +55149 GCA_902686455.2_mSciVul1.2 mammals 7906 GCA_902713425.1_fAciRut3.1_maternal_haplotype fish 7906 GCA_902713435.1_fAciRut3.1_paternal_haplotype fish 7906 GCA_902713435.2_fAciRut3.2_paternal_haplotype fish +7830 GCA_902713615.2_sScyCan1.2 sharks +7830 GCA_902713625.2_sScyCan1.2_alternate_haplotype sharks 7955 GCA_903684855.2_fDreTuH1.2 fish 7955 GCA_903684865.1_fDreABH1.1 fish 37610 GCA_903797565.2_bEriRub2.2_alternate_haplotype birds 37610 GCA_903797595.2_bEriRub2.2 birds +59474 GCA_903992515.1_mPipPip1.1_alternate_haplotype mammals +1047088 GCA_903992525.1_mArvAmp1.1_alternate_haplotype mammals 59474 GCA_903992545.1_mPipPip1.1 mammals 8177 GCA_904848175.1_fAcaLat1.1_alternate_haplotype fish 36212 GCA_905171655.2_fTraTra1.2_alternate_haplotype fish 36212 GCA_905171665.2_fTraTra1.2 fish +8384 GCA_905171715.1_aBufBuf1.1_alternate_haplotype amphibians +8407 GCA_905171725.1_aRanTem1.1_alternate_haplotype amphibians +9612 GCA_905319845.1_mCanLor1.1_alternate_haplotype mammals 9612 GCA_905319855.2_mCanLor1.2 mammals 111811 GCA_907165065.1_bCapEur3.1 birds 111811 GCA_907165095.1_bCapEur3.1_alternate_haplotype birds 61643 GCA_910589325.1_fTauBub2.1_alternate_haplotype fish 61643 GCA_910589615.1_fTauBub2.1 fish 56726 GCA_910591455.2_fPhoGun1.2 fish 56726 GCA_910591705.2_fPhoGun1.2_alternate_haplotype fish +9860 GCA_910593805.1_mCerEla1.1_alternate_haplotype mammals 8240 GCA_910596085.1_fThuMac1.1_alternate_haplotype fish 8236 GCA_914744365.1_fThuAlb1.1_alternate_haplotype fish +9662 GCA_922984935.2_mMelMel3.2_paternal_haplotype mammals 9662 GCA_922990625.1_mMelMel3.1_maternal_haplotype_uncurated mammals 8957 GCA_929443795.2_bAccGen1.2 birds 8957 GCA_929447715.1_bAccGen1.1_alternate_haplotype birds 446457 GCA_933228915.1_fTelBon1.1 fish 446457 GCA_933228925.1_fTelBon1.1_alternate_haplotype fish 40830 GCA_936440315.1_fBarBab1.1 fish 40830 GCA_936446605.1_fBarBab1.1_alternate_haplotype fish +9733 GCA_937001455.1_mOrcOrc1.1_alternate_haplotype mammals 7955 GCA_944039255.1_fDanRer4.1_alternate_haplotype fish 7955 GCA_944039275.1_fDanRer4.1 fish 933932 GCA_946807865.1_fSilAri3.1_alternate_haplotype fish 933932 GCA_946808225.1_fSilAri3.1 fish 135647 GCA_947034865.1_fBarBar1.1 fish 135647 GCA_947034905.1_fBarBar1.1_alternate_haplotype fish 10129 GCA_947179515.1_mApoSyl1.1 mammals +10129 GCA_947179525.1_mApoSyl1.1_alternate_haplotype mammals 103942 GCA_947247025.1_rVipUrs1.1_alternate_haplotype reptiles 103942 GCA_947247035.1_rVipUrs1.1 reptiles 8262 GCA_947347695.1_fPlePla1.1_alternate_haplotype fish 8969 GCA_947461875.1_bHalAlb1.1 birds 8969 GCA_947461935.1_bHalAlb1.1_alternate_haplotype birds +161584 GCA_948146095.1_fSynAcu2.1_alternate_haplotype fish +161584 GCA_948146105.1_fSynAcu2.1 fish +58324 GCA_949152265.1_fPhoPho1.1 fish +58324 GCA_949152275.1_fPhoPho1.1_alternate_haplotype fish +8260 GCA_949316195.1_fPlaFle2.1_alternate_haplotype fish +8260 GCA_949316205.1_fPlaFle2.1 fish +134920 GCA_949316245.1_fPunPun2.1_alternate_haplotype fish +10090 GCA_949316305.1_mMusMuc1.1_alternate_haplotype mammals +10090 GCA_949316315.1_mMusMuc1.1 mammals +134920 GCA_949316345.1_fPunPun2.1 fish +8284 GCA_949319135.1_fSquCep2.1 fish +8284 GCA_949319155.1_fSquCep2.1_alternate_haplotype fish +27704 GCA_949357685.1_fGobGob1.1 fish +27704 GCA_949357705.1_fGobGob1.1_alternate_haplotype fish +1484357 GCA_949357725.1_fHypImm3.1 fish +1484357 GCA_949358355.1_fHypImm3.1_alternate_haplotype fish +101497 GCA_949606865.1_fNotRos5.1_alternate_haplotype fish +101497 GCA_949606895.1_fNotRos5.1 fish +126867 GCA_949628205.1_bGulAri2.1_alternate_haplotype birds +126867 GCA_949628215.1_bGulAri2.1 birds +1091424 GCA_949748265.1_fMelGel1.1_alternate_haplotype fish +1091424 GCA_949748355.1_fMelGel1.1 fish +48744 GCA_949752795.1_mHypAmp2.1 mammals +48744 GCA_949752845.1_mHypAmp2.1_alternate_haplotype mammals +27610 GCA_949774935.1_mLagAlb1.1_alternate_haplotype mammals +27610 GCA_949774975.1_mLagAlb1.1 mammals +9728 GCA_949987515.1_mDelDel1.1 mammals +9728 GCA_949987525.1_mDelDel1.1_alternate_haplotype mammals +473354 GCA_949987545.1_fBorAnt1.1_alternate_haplotype fish +473354 GCA_949987555.1_fBorAnt1.1 fish +246814 GCA_949987585.1_mPipPyg2.1 mammals +185739 GCA_949987605.1_fPolPol2.1_alternate_haplotype fish +185739 GCA_949987615.1_fPolPol2.1 fish +146480 GCA_949987685.1_fAmmMar1.1 fish +246814 GCA_949987765.1_mPipPyg2.1_alternate_haplotype mammals +146480 GCA_950004245.1_fAmmMar1.1_alternate_haplotype fish +9767 GCA_950005055.1_mBalAcu1.1_alternate_haplotype mammals +269649 GCA_950005115.1_mChiNiv1.1_alternate_haplotype mammals +9365 GCA_950295305.1_mEriEur2.1_alternate_haplotype mammals +9365 GCA_950295315.1_mEriEur2.1 mammals +206093 GCA_951214905.1_fEleAnt2.1_alternate_haplotype fish +206093 GCA_951216825.1_fEleAnt2.1 fish +100830 GCA_951394355.1_bTetUro1.1_alternate_haplotype birds +100830 GCA_951394365.1_bTetUro1.1 birds +9737 GCA_951394435.1_mSteCoe1.1 mammals +9737 GCA_951394445.1_mSteCoe1.1_alternate_haplotype mammals +59451 GCA_951640355.1_mEptNil1.1 mammals +59451 GCA_951640545.1_mEptNil1.1_alternate_haplotype mammals +446415 GCA_951799395.1_fArgSil1.1 fish +446415 GCA_951799415.1_fArgSil1.1_alternate_haplotype fish +85417 GCA_951799975.1_fGobNig1.1 fish +48668 GCA_951802655.1_fRutRut2.1_alternate_haplotype fish +48668 GCA_951802725.1_fRutRut2.1 fish +1330250 GCA_951804945.1_rPodCre2.1 reptiles +1330250 GCA_951804955.1_rPodCre2.1_alternate_haplotype reptiles +90069 GCA_958295035.1_fSolSol10.1_alternate_haplotype fish +64108 GCA_960530785.1_fZeuFab8.1_alternate_haplotype fish +64108 GCA_960531495.1_fZeuFab8.1 fish +187126 GCA_963082445.1_bNesMay2.1_alternate_haplotype birds +187126 GCA_963082525.1_bNesMay2.1 birds +217509 GCA_963082795.1_fCarCar2.1_alternate_haplotype fish +431183 GCA_963082865.1_kaCorEumy4.1_alternate_haplotype otherChordates +431183 GCA_963082875.1_kaCorEumy4.1 otherChordates +148596 GCA_963210275.1_bFalPun1.1_alternate_haplotype birds +148596 GCA_963210335.1_bFalPun1.1 birds +98922 GCA_963242275.1_mMyoDau2.1_alternate_haplotype mammals +232653 GCA_963243765.1_bPsiEch3.1_alternate_haplotype birds +232653 GCA_963264785.1_bPsiEch3.1 birds +948025 GCA_963280865.1_fGymBra2.1 fish +948025 GCA_963281105.1_fGymBra2.1_alternate_haplotype fish +56720 GCA_963383615.1_fLipPho2.1 fish +56720 GCA_963383635.1_fLipPho2.1_alternate_haplotype fish +39082 GCA_963383645.1_mMusAve1.1 mammals +39082 GCA_963383665.1_mMusAve1.1_alternate_haplotype mammals 30522 GCF_003369695.1_UOA_Brahman_1 mammals 9244 GCF_003957555.1_bCalAnn1_v1.p birds 59729 GCF_003957565.1_bTaeGut1_v1.p birds 59729 GCF_003957565.2_bTaeGut1.4.pri birds 2489341 GCF_004027225.2_bStrHab1.2.pri birds 9258 GCF_004115215.2_mOrnAna1.pri.v4 mammals 59479 GCF_004115265.1_mRhiFer1_v1.p mammals 59479 GCF_004115265.2_mRhiFer1_v1.p mammals 89673 GCF_004126475.1_mPhyDis1_v1.p mammals 89673 GCF_004126475.2_mPhyDis1.pri.v3 mammals 63155 GCF_007364275.1_fArcCen1 fish 1825980 GCF_007399415.2_rGopEvg1_v1.p reptiles 61383 GCF_007474595.1_mLynCan4_v1.p mammals 61383 GCF_007474595.2_mLynCan4.pri.v2 mammals 42100 GCF_008692025.1_mPhoSin1.pri mammals @@ -404,30 +579,31 @@ 2857398 GCF_027887145.1_bAmmCau1.pri birds 2991368 GCF_027887155.1_rMalTer1.hap1 reptiles 13616 GCF_027887165.1_mMonDom1.pri mammals 44398 GCF_028018845.1_bMelGeo1.pri birds 75485 GCF_028500815.1_bRisTri1.patW.cur.20221130 birds 9117 GCF_028858705.1_bGruAme1.mat birds 327740 GCF_029499605.1_aHylSar1.hap1 amphibians 2546036 GCF_029633865.1_fLamInc1.hap2 fish 460621 GCF_029931775.1_rEulEur1.hap1 reptiles 143292 GCF_030020395.1_mManPen7.hap1 mammals 575201 GCF_030028045.1_mHipAmp2.hap2 mammals 9666 GCF_030435805.1_mMusLut2.pri mammals 9361 GCF_030445035.1_mDasNov1.hap2 mammals 48891 GCF_030490865.1_bPoeAtr1.hap1 birds 3053191 GCF_030684315.1_sSteTig4.hap1 sharks +8496 GCF_030867095.1_rAllMis1 reptiles 8154 GCF_900246225.1_fAstCal1.2 fish 64144 GCF_900324465.2_fAnaTes1.2 fish 205130 GCF_900324485.2_fMasArm1.2 fish 223781 GCF_900496995.1_bAquChr1.2 birds 223781 GCF_900496995.4_bAquChr1.4 birds 56716 GCF_900634415.1_fCotGob3.1 fish 210632 GCF_900634625.1_fParRan2.1 fish 441366 GCF_900634775.1_fGouWil2.1 fish 158456 GCF_900634795.2_fBetSpl5.2 fish 158456 GCF_900634795.3_fBetSpl5.3 fish 158456 GCF_900634795.4_fBetSpl5.4 fish 299321 GCF_900700375.1_fDenClu1.1 fish 27687 GCF_900747795.1_fErpCal1.1 fish 27687 GCF_900747795.2_fErpCal1.3 fish 8175 GCF_900880675.1_fSpaAur1.1 fish