File Changes for hiram
switch to commits view, user indexv458_preview to v458_preview2 (2023-11-27 to 2023-12-04) v458
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- src/hg/htdocs/inc/gbPageStartHardcoded.html
- lines changed 4, context: html, text, full: html, text
af1ee4ab704bbf67117d4841eb4bd14963289672 Tue Nov 28 13:24:43 2023 -0800
OK to have a lang=en in html tag and do not need to declare type of script for javascript included refs #29545
- lines changed 1, context: html, text, full: html, text
e5d251ed7f70081803a4198cec5526c6a0f83f0e Tue Nov 28 13:30:55 2023 -0800
the pipe symbol in the URL to googleapis should be encoded as %7C instead of plain text refs #29545
- src/hg/makeDb/doc/asmHubs/commonHtml.pm
- lines changed 3, context: html, text, full: html, text
6e2ce95748a6b80895027e24e6f5086890d169bc Tue Nov 28 14:10:37 2023 -0800
correct style statements in html elements for border and text alignment and do not declare type javascript refs #29545
- src/hg/makeDb/doc/asmHubs/master.run.list
- lines changed 2, context: html, text, full: html, text
4d8026612d9d5a30705394c18ab8948a8fb12e12 Wed Nov 29 11:16:09 2023 -0800
adding a couple of VGP fish refs #29545
- lines changed 3, context: html, text, full: html, text
b65675bc7cab7726ddcc5de2fb46192460143f76 Thu Nov 30 12:26:13 2023 -0800
update catching up for VGP assemblies refs #29545
- src/hg/makeDb/doc/asmHubs/mkAsmStats.pl
- lines changed 19, context: html, text, full: html, text
6e2ce95748a6b80895027e24e6f5086890d169bc Tue Nov 28 14:10:37 2023 -0800
correct style statements in html elements for border and text alignment and do not declare type javascript refs #29545
- src/hg/makeDb/doc/asmHubs/mkHubIndex.pl
- lines changed 1, context: html, text, full: html, text
608a494f6dda29a4e7529680507ac894d78913fe Tue Nov 28 13:02:48 2023 -0800
a less than bare character should be html encoded refs #29545
- lines changed 18, context: html, text, full: html, text
6e2ce95748a6b80895027e24e6f5086890d169bc Tue Nov 28 14:10:37 2023 -0800
correct style statements in html elements for border and text alignment and do not declare type javascript refs #29545
- src/hg/makeDb/doc/asmHubs/trackData.pl
- lines changed 13, context: html, text, full: html, text
6e2ce95748a6b80895027e24e6f5086890d169bc Tue Nov 28 14:10:37 2023 -0800
correct style statements in html elements for border and text alignment and do not declare type javascript refs #29545
- src/hg/makeDb/doc/fishAsmHub/fish.orderList.tsv
- lines changed 2, context: html, text, full: html, text
4d8026612d9d5a30705394c18ab8948a8fb12e12 Wed Nov 29 11:16:09 2023 -0800
adding a couple of VGP fish refs #29545
- lines changed 1, context: html, text, full: html, text
b65675bc7cab7726ddcc5de2fb46192460143f76 Thu Nov 30 12:26:13 2023 -0800
update catching up for VGP assemblies refs #29545
- src/hg/makeDb/doc/legacyAsmHub/legacy.clade.txt
- lines changed 1, context: html, text, full: html, text
2dcb37891539b5291a228543bbe951e599d8d75b Mon Nov 27 12:48:18 2023 -0800
catch up the clouded leopard refs #29545
- lines changed 1, context: html, text, full: html, text
4d8026612d9d5a30705394c18ab8948a8fb12e12 Wed Nov 29 11:16:09 2023 -0800
adding a couple of VGP fish refs #29545
- lines changed 1, context: html, text, full: html, text
58a7e78f00de4c0c7b6e82454d2cb4a28ef2d35e Wed Nov 29 12:19:12 2023 -0800
adding GCA_019393635.1_mDroGli1.pri refs #29545
- src/hg/makeDb/doc/legacyAsmHub/legacy.orderList.tsv
- lines changed 7, context: html, text, full: html, text
4d8026612d9d5a30705394c18ab8948a8fb12e12 Wed Nov 29 11:16:09 2023 -0800
adding a couple of VGP fish refs #29545
- lines changed 1, context: html, text, full: html, text
b65675bc7cab7726ddcc5de2fb46192460143f76 Thu Nov 30 12:26:13 2023 -0800
update catching up for VGP assemblies refs #29545
- src/hg/makeDb/doc/mammalsAsmHub/mammals.orderList.tsv
- lines changed 2, context: html, text, full: html, text
b65675bc7cab7726ddcc5de2fb46192460143f76 Thu Nov 30 12:26:13 2023 -0800
update catching up for VGP assemblies refs #29545
- src/hg/makeDb/doc/vertebrateAsmHub/vertebrate.orderList.tsv
- lines changed 1, context: html, text, full: html, text
b65675bc7cab7726ddcc5de2fb46192460143f76 Thu Nov 30 12:26:13 2023 -0800
update catching up for VGP assemblies refs #29545
- src/hg/makeDb/doc/vgpAsmHub/vgp.primary.orderList.tsv
- lines changed 3, context: html, text, full: html, text
14d09b34efe9b204e474eaed455471fcbb7fce8f Mon Nov 27 11:15:15 2023 -0800
update adding a couple assemblies refs #29545
- src/hg/makeDb/doc/vgpAsmHub/vgp.taxId.asmId.class.txt
- lines changed 3, context: html, text, full: html, text
4e5750a7503e2489ca5be1c5dc51f461ee3f8421 Mon Nov 27 11:22:28 2023 -0800
update brings in three new assemblies refs #29545
- src/hg/makeDb/trackDb/human/hg38/hprcChainNet.ra
- lines changed 1635, context: html, text, full: html, text
ac7a713337149211893dc0eace64428fe67ff133 Fri Dec 1 14:22:35 2023 -0800
replace the two tracks HPRC Chains and Nets by one single composite refs #31561
- lines changed 2, context: html, text, full: html, text
06892385ac11355c4469ec93d9714a9dbf7916f1 Fri Dec 1 14:28:04 2023 -0800
will need to turn on some useful default set of tracks refs #31561
- src/hg/makeDb/trackDb/human/hg38/trackDb.447way.ra
- lines changed 1, context: html, text, full: html, text
c57fe7f817a8918fac663b8f7b0e6a2f2af603f4 Fri Dec 1 17:42:51 2023 -0800
spurious string in the middle of nowhere refs #31528
- src/hg/makeDb/trackDb/human/hg38/trackDb.ra
- lines changed 8, context: html, text, full: html, text
ac7a713337149211893dc0eace64428fe67ff133 Fri Dec 1 14:22:35 2023 -0800
replace the two tracks HPRC Chains and Nets by one single composite refs #31561
- src/hg/utils/automation/doAssemblyHub.pl
- lines changed 2, context: html, text, full: html, text
69bd7a8ab744d23ab1e364f1bdbcde1add08a6cf Thu Nov 30 14:42:50 2023 -0800
do not use windowMasker when it claims to have masked everything refs #29545
- src/hg/utils/automation/doNcbiRefSeq.pl
- lines changed 2, context: html, text, full: html, text
1da1aecdb839e7ad81e55650cab403780076e198 Thu Nov 30 09:00:53 2023 -0800
correct cleanup symLinks refs #29545
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