bb03547b54fe7e5013d811c2f92c35a9ecdbfba4 jcasper Mon Dec 11 10:39:43 2023 -0800 Fixing minor typo in GBiB update script for encRegTfbsClustered, no ticket diff --git src/browserbox/root/updateBrowser.sh src/browserbox/root/updateBrowser.sh index ea500a0..fecfbac 100755 --- src/browserbox/root/updateBrowser.sh +++ src/browserbox/root/updateBrowser.sh @@ -395,31 +395,31 @@ touch /data/mysql/hg38/$i.frm; done # adding tables that are required for gtex, which is now a default track, #19587 touch /data/mysql/hgFixed/gtexInfo.{MYI,MYD,frm} touch /data/mysql/hgFixed/gtexTissue.{MYI,MYD,frm} # -- END JUNE 2017 # add gtex v8 data, which is now a default track, #27854: touch /data/mysql/hg38/gtexGeneModelV8.{MYI,MYD,frm} touch /data/mysql/hg38/gtexGeneV8.{MYI,MYD,frm} touch /data/mysql/hgFixed/gtexTissueV8.{MYI,MYD,frm} # add encode cCREs track, #32440 -touch /data/mysql/hg38/encRegTfbsClusteredSources.{MYi,MYD,frm} +touch /data/mysql/hg38/encRegTfbsClusteredSources.{MYI,MYD,frm} # Feb 2021, knownCds is required for knownGene display for db in hg38 mm10; do if [ -e "/data/mysql/$db" ] ; then touch /data/mysql/$db/knownCds.{MYI,MYD,frm} fi done if [ "$1" != "hgwdev" ] ; then echo - Updating GBDB files... rsync $RSYNCOPTS --existing rsync://hgdownload.soe.ucsc.edu/gbdb/ /data/gbdb/ chown -R www-data.www-data /data/gbdb/ fi echo - Pulling other files