c5434ed7a6bace4f29fcd2de7efc8babb82cf070 hiram Tue Jan 23 10:31:37 2024 -0800 nine new assemblies from the T2T primates project refs #29545 diff --git src/hg/makeDb/doc/legacyAsmHub/legacy.clade.txt src/hg/makeDb/doc/legacyAsmHub/legacy.clade.txt index 025f7ef..d9952bd 100644 --- src/hg/makeDb/doc/legacyAsmHub/legacy.clade.txt +++ src/hg/makeDb/doc/legacyAsmHub/legacy.clade.txt @@ -180,30 +180,32 @@ GCA_027406575.1_mNycCou1.pri mammals GCA_027409825.1_fScoJap1.pri fish GCA_027477595.1_bHaeMex1.pri birds GCA_027579445.1_bAmmNel1.pri birds GCA_027579695.1_fNeoGra1.pri fish GCA_027579735.1_aBomBom1.pri vertebrate GCA_027887145.1_bAmmCau1.pri birds GCA_027887155.1_rMalTer1.hap1 vertebrate GCA_027887165.1_mMonDom1.pri mammals GCA_028018385.1_mNeoNeb1.pri mammals GCA_028018845.1_bMelGeo1.pri birds GCA_028023285.1_mBalRic1.hap2 mammals GCA_028500815.1_bRisTri1.patW.cur.20221130 birds GCA_028564815.1_mEubGla1.hap2 mammals GCA_028858705.1_bGruAme1.mat birds +GCA_028858805.1_NHGRI_mPanTro3-v1.1-hic.freeze_alt primates +GCA_028885525.1_NHGRI_mPonPyg2-v1.1-hic.freeze_alt primates GCA_029499605.1_aHylSar1.hap1 vertebrate GCA_029633865.1_fLamInc1.hap2 fish GCA_030028045.1_mHipAmp2.hap2 mammals GCA_030144855.1_sHypSab1.hap1 vertebrate GCA_030435805.1_mMusLut2.pri mammals GCA_030684315.1_sSteTig4.hap1 vertebrate GCA_030867065.1_rAllMis1 vertebrate GCA_030867095.1_rAllMis1 vertebrate GCA_030936135.1_bGavSte3.hap2 birds GCA_900006655.3_Susie3 primates GCA_900094665.2_CAROLI_EIJ_v1.1 mammals GCA_900324465.2_fAnaTes1.2 fish GCA_900634415.1_fCotGob3.1 fish GCA_900634775.1_fGouWil2.1 fish GCA_901343595.1_MONAX5 mammals @@ -392,30 +394,35 @@ GCF_015228065.1_NSTDA_Pmon_1 invertebrate GCF_015237465.1_rCheMyd1.pri vertebrate GCF_016086655.2_UVic_Lsal_1.1 invertebrate GCF_016699345.1_BCM_Sbol_2.0 primates GCF_016700215.1_bGalGal1.pat.whiteleghornlayer.GRCg7w birds GCF_016746245.1_Prin_Dsan_1.0 invertebrate GCF_016746365.1_Prin_Dyak_Tai18E2_2.0 invertebrate GCF_016746395.1_Prin_Dsim_3.0 invertebrate GCF_016801865.1_TS_Cpip_V1 invertebrate GCF_016920785.1_Ixodes_scapularus_ComboLowHiFi invertebrate GCF_017639655.1_bFalNau1.pat birds GCF_021218885.1_Marmota_monax_Labrador192_V1.0 mammals GCF_021288785.1_ASM2128878v2 mammals GCF_022539665.1_CSIRO_AGI_Dcar_v0.2 invertebrate GCF_023065955.1_UrsArc1.0 mammals +GCF_028858775.1_NHGRI_mPanTro3-v1.1-hic.freeze_pri primates +GCF_028878055.1_NHGRI_mSymSyn1-v1.1-hic.freeze_pri primates +GCF_028885625.1_NHGRI_mPonPyg2-v1.1-hic.freeze_pri primates +GCF_028885655.1_NHGRI_mPonAbe1-v1.1-hic.freeze_pri primates +GCF_029289425.1_NHGRI_mPanPan1-v1.1-0.1.freeze_pri primates GCF_900094665.1_CAROLI_EIJ_v1.1 mammals GCF_900246225.1_fAstCal1.2 fish GCF_900324465.1_fAnaTes1.1 fish GCF_900324465.2_fAnaTes1.2 fish GCF_900324485.1_fMasArm1.1 fish GCF_900496995.1_bAquChr1.2 birds GCF_900634625.1_fParRan2.1 fish GCF_900634775.1_fGouWil2.1 fish GCF_900634795.2_fBetSpl5.2 fish GCF_900634795.3_fBetSpl5.3 fish GCF_900700375.1_fDenClu1.1 fish GCF_900700415.1_Ch_v2.0.2 fish GCF_900747795.1_fErpCal1.1 vertebrate GCF_900880675.1_fSpaAur1.1 fish GCF_900963305.1_fEcheNa1.1 fish