cfe4c0816778b8d58fe613cb8f4d221ca8a4f312
hiram
  Thu Jan 25 15:28:45 2024 -0800
spell check refs #32871

diff --git src/hg/utils/automation/asmHubRmodelJoinAlign.pl src/hg/utils/automation/asmHubRmodelJoinAlign.pl
index 035aaf9..ced51f1 100755
--- src/hg/utils/automation/asmHubRmodelJoinAlign.pl
+++ src/hg/utils/automation/asmHubRmodelJoinAlign.pl
@@ -150,31 +150,31 @@
 denoted as grayscale boxes, reflecting both the size of the repeat and
 the amount of base mismatch, base deletion, and base insertion associated with a repeat element.
 The higher the combined number of these, the lighter the shading.
 <br>
 <br>
 <!-- t2tRepeatMasker-orig-pack-mode.png -->
 <img height="116" width="1216" src="/images/rmskClassicPack.jpg">
 </p>
 <h4>Full Mode Visualization</h4>
 <p>
 In the most detailed visualization repeats are displayed as chevron boxes, indicating the size and orientation of
 the repeat.  The interior grayscale shading represents the divergence of the repeat (see above) while the outline color
 represents the class of the repeat. Dotted lines above the repeat and extending left or right
 indicate the length of unaligned repeat model sequence and provide context for where a repeat fragment originates in its
 consensus or pHMM model.  If the length of the unaligned sequence
-is large, an iterruption line and bp size is indicated instead of drawing the extension to scale.
+is large, an interruption line and bp size is indicated instead of drawing the extension to scale.
 <br>
 <br>
 <!-- t2tRepeatMasker-full-mode.png -->
 <img height="90" width="1098" src="/images/rmskFull.jpg">
 </p>
 <p>
 For example, the following repeat is a SINE element in the forward orientation with average
 divergence. Only the 5' proximal fragment of the consensus sequence is aligned to the genome.
 The 3' unaligned length (384bp) is not drawn to scale and is instead displayed using a set of
 interruption lines along with the length of the unaligned sequence.
 </p>
 <img height="66" width="474" src="/images/rmskSine384.jpg">
 <p>
 Repeats that have been fragmented by insertions or large internal deletions are now represented
 by join lines.  In the example below, a LINE element is found as two fragments.  The solid