16f9dcdc9a1ed10c08aae7908039627e194488a6 max Fri Jan 12 01:00:29 2024 -0800 trying a new thing: making clinvar ALPHA track appear on hgwdev and also the public release track, at the same time. Also activating version.txt now that the file has made it to the RR through the autopusher change and autopusher update, emails with QA and cluster-admin diff --git src/hg/makeDb/trackDb/human/clinvar.ra src/hg/makeDb/trackDb/human/clinvar.ra index a774b37..0bc3135 100644 --- src/hg/makeDb/trackDb/human/clinvar.ra +++ src/hg/makeDb/trackDb/human/clinvar.ra @@ -1,26 +1,27 @@ track clinvar compositeTrack on shortLabel ClinVar Variants longLabel ClinVar Variants group phenDis visibility hide type bed 12 + noParentConfig on itemRgb on urls rcvAcc="https://www.ncbi.nlm.nih.gov/clinvar/$$/" geneId="https://www.ncbi.nlm.nih.gov/gene/$$" snpId="https://www.ncbi.nlm.nih.gov/snp/$$" nsvId="https://www.ncbi.nlm.nih.gov/dbvar/variants/$$/" origName="https://www.ncbi.nlm.nih.gov/clinvar/variation/$$/" scoreLabel ClinVar Star-Rating (0-4) +dataVersion /gbdb/$D/bbi/clinvarAlpha/version.txt track clinvarMain parent clinvar shortLabel ClinVar SNVs longLabel ClinVar Short Variants < 50bp visibility hide group phenDis itemRgb on priority 1 type bigBed 12 + showCfg on # note that you cannot change these values. Old carts will contain them. If you must change these, you'll have to rename # the field, which will reset the cart variables. Or use the cart rewrite mechanism. You can add more values, though filterValues._clinSignCode BN|benign,LB|likely benign,CF|conflicting,PG|pathogenic,LP|likely pathogenic,RF|risk factor,OT|other,VUS|vus filterType._clinSignCode multiple