eabfddf59feb8e088b8d90e1ba9fe34be4b27e49 max Tue Jan 9 13:20:24 2024 -0800 gbic error message docs, email from Jorge diff --git src/product/installer/browserSetup.sh src/product/installer/browserSetup.sh index bfc2310..74c822f 100644 --- src/product/installer/browserSetup.sh +++ src/product/installer/browserSetup.sh @@ -1374,30 +1374,32 @@ # removed these now for the new hgGateway page, Apr 2016 # by default hgGateway needs an empty hg19 database, will crash otherwise # $MYSQL -e 'CREATE DATABASE IF NOT EXISTS hg19' # mm9 needs an empty hg18 database $MYSQL -e 'CREATE DATABASE IF NOT EXISTS hg18' $MYSQL -e "FLUSH PRIVILEGES;" } # main function, installs the browser on Redhat/Debian and potentially even on OSX function installBrowser () { if [ -f $COMPLETEFLAG ]; then echo2 error: the file $COMPLETEFLAG exists. It seems that you have installed the browser already. + echo2 If you want to reset the Apache directory, you can run '"rm -rf /usr/local/apache"' and + echo2 then run this script again. exit 100 fi echo '--------------------------------' echo UCSC Genome Browser installation echo '--------------------------------' echo Detected OS: $OS/$DIST, Version $VERNUM, Release: $VER echo echo This script will go through three steps: echo "1 - setup apache and mysql, open port 80, deactivate SELinux" echo "2 - copy CGI binaries into $CGIBINDIR, html files into $HTDOCDIR" echo "3 - optional: download genome assembly databases into mysql and /gbdb" echo echo This script will now install and configure Mysql and Apache if they are not yet installed. echo "Your distribution's package manager will be used for this."