Commits for angie

v460_preview to v460_preview2 (2024-01-16 to 2024-01-22) v460

282d648d8896a7bb45af20bbc306873f6a5ffb87 Wed Jan 17 11:03:32 2024 -0800

• Added chrUn_KI270752v1 to hg38.{p11,p12,p13}.chromAlias.txt files after user pointed out in MLQ #32874 that it was missing. It is present in hg38.p14.chromAlias.txt and all *chromAlias.bb files.
  • src/hg/makeDb/doc/hg38/patchUpdate.11.txt - lines changed 21, context: html, text, full: html, text
  • src/hg/makeDb/doc/hg38/patchUpdate.12.txt - lines changed 21, context: html, text, full: html, text
  • src/hg/makeDb/doc/hg38/patchUpdate.13.txt - lines changed 21, context: html, text, full: html, text

d3871113f7407a94dfb3eb8b137df9facd39776e Wed Jan 17 11:06:45 2024 -0800

• New lineages as well as some path tweaks for older lineages found to be missing a lot of designated sequences.
  • src/hg/utils/otto/sarscov2phylo/pango.clade-mutations.tsv - lines changed 47, context: html, text, full: html, text