8952fb88f8c87e5440d1ed298dde430d7d01782d
gperez2
  Thu Jan 18 16:24:35 2024 -0800
Updating shortLabel and moving the covidMuts track to phenDis bluebar group, email from Bob, refs #32844

diff --git src/hg/makeDb/trackDb/human/trackDb.ra src/hg/makeDb/trackDb/human/trackDb.ra
index 97562a7..87c6c3b 100644
--- src/hg/makeDb/trackDb/human/trackDb.ra
+++ src/hg/makeDb/trackDb/human/trackDb.ra
@@ -5589,38 +5589,38 @@
 semiShortCircuit 1
 termRegex nssv[0-9]+
 searchType bed
 searchPriority 50
 
 searchTable cnvDevDelayControl
 semiShortCircuit 1
 termRegex nssv[0-9]+
 searchType bed
 searchPriority 50
 
 include covidHgiGwas.ra
 
 track covidMuts
 type bigBed 12 + 
-shortLabel Rare Harmful Vars
+shortLabel COVID Rare Harmful Var
 longLabel Rare variants underlying COVID-19 severity and susceptibility from the COVID Human Genetics Effort
 mouseOver $gene $name $rsId Genotype: $genotype; Zygosity: $zygo ; Inheritance: $inhMode
 labelFields gene, name
 defaultLabelFields gene, name
 noScoreFilter on
 priority 2.2
-group varRep
+group phenDis
 color 179,0,0
 visibility hide
 bigDataUrl /gbdb/$D/covidMuts/covidMuts.bb
 multiRegionsBedUrl /gbdb/$D/covidMuts/covidMuts.regions.bed
  
 track orphadata
 bigDataUrl /gbdb/$D/bbi/orphanet/orphadata.bb
 shortLabel Orphanet
 longLabel Orphadata: Aggregated Data From Orphanet
 group phenDis
 type bigBed 9 +
 bedNameLabel OrphaCode
 url http://www.orpha.net/consor/cgi-bin/OC_Exp.php?lng=en&Expert=$$
 urlLabel OrphaNet Phenotype Link:
 urls ensemblID="https://grch37.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=$$" pmid="https://pubmed.ncbi.nlm.nih.gov/$$" orphaCode="http://www.orpha.net/consor/cgi-bin/OC_Exp.php?lng=en&Expert=$$" omim="https://www.omim.org/entry/$$?search=$$&highlight=$$" hgnc="https://www.genenames.org/data/gene-symbol-report/#!/hgnc_id/HGNC:$$"