176447e76f5e9b9a9b37b6e3954587fc4e3cb1c4 hiram Sat Feb 17 22:41:29 2024 -0800 an update to catch up VGP assemblies refs #29545 diff --git src/hg/makeDb/doc/legacyAsmHub/legacy.clade.txt src/hg/makeDb/doc/legacyAsmHub/legacy.clade.txt index 39cce8b..21484a7 100644 --- src/hg/makeDb/doc/legacyAsmHub/legacy.clade.txt +++ src/hg/makeDb/doc/legacyAsmHub/legacy.clade.txt @@ -88,45 +88,48 @@ GCA_002940915.2_ASM294091v2 mammals GCA_002966995.1_ASM296699v1 mammals GCA_003031525.1_Neophocaena_asiaeorientalis_V1 mammals GCA_003327715.1_PumCon1.0 mammals GCA_003640425.2_ASM364042v2 invertebrate GCA_003957555.2_bCalAnn1_v1.p birds GCA_003957565.2_bTaeGut1_v1.p birds GCA_003990815.1_ASM399081v1 invertebrate GCA_004023825.1_VulLag_v1_BIUU mammals GCA_004023905.1_SurSur_v1_BIUU mammals GCA_004024565.1_ZalCal_v1_BIUU mammals GCA_004024665.1_LemCat_v1_BIUU primates GCA_004024745.1_CatWag_v1_BIUU mammals GCA_004024865.1_RouAeg_v1_BIUU mammals GCA_004024905.1_TapInd_v1_BIUU mammals +GCA_004025005.1_TadBra_v1_BIUU mammals GCA_004025105.1_TamTet_v1_BIUU mammals GCA_004026685.1_MonMon_M_v1_BIUU mammals GCA_004026725.1_OnyTor_v1_BIUU mammals GCA_004026785.1_MerUng_v1_BIUU mammals GCA_004026985.1_MyoMyo_v1_BIUU mammals GCA_004027225.2_bStrHab1.2.pri birds GCA_004027395.1_CanFam_VD_v1_BIUU mammals GCA_004027435.1_ArtJam_v1_BIUU mammals GCA_004027515.1_AntAmePen_v1_BIUU mammals GCA_004027675.1_CasCan_v1_BIUU mammals GCA_004027815.1_NycCou_v1_BIUU primates GCA_004027855.1_ChoDid_v1_BIUU mammals GCA_004027935.1_ChrAsi_v1_BIUU mammals +GCA_004363495.1_PhoPho_v1_BIUU mammals GCA_004115215.3_mOrnAna1.pri.v3 mammals GCA_004115265.2_mRhiFer1_v1.p mammals +GCA_004363515.1_IniGeo_v1_BIUU mammals GCA_004365145.1_OryAfe_v1_BIUU mammals GCA_004365275.1_TupTan_v1_BIUU mammals GCA_006229205.1_meerkat_22Aug2017_6uvM2_HiC mammals GCA_007210705.1_Tcal_SD_v2.1 invertebrate GCA_007364275.2_fArcCen1 fish GCA_009663435.1_Callithrix_jacchus_cj1700_1.0 primates GCA_009762305.1_mZalCal1.pri mammals GCA_009762595.1_rDerCor1.alt vertebrate GCA_009764475.1_sPriPec2.pri vertebrate GCA_009764565.1_rDerCor1.pri vertebrate GCA_009769485.1_bCygOlo1.alt birds GCA_009769545.1_fCycLum1.pri fish GCA_009769625.1_bCygOlo1.pri birds GCA_009806435.2_UM_NZW_1.0 mammals GCA_009819505.1_bCatUst1.alt birds @@ -314,30 +317,31 @@ GCF_001640805.1_ASM164080v1 fish GCF_001649575.1_ASM164957v1 fish GCF_001652005.1_ASM165200v1 invertebrate GCF_001659605.1_Manihot_esculenta_v6 plants GCF_001660625.1_IpCoco_1.2 fish GCF_001660625.2_IpCoco_1.2 fish GCF_001663975.1_Xenopus_laevis_v2 vertebrate GCF_001687245.1_Rhagoletis_zephyria_1.0 invertebrate GCF_001698545.1_ASM169854v1 primates GCF_001704415.1_ARS1 mammals GCF_001890085.1_ASM189008v1 mammals GCF_001891065.1_H_comes_QL1_v1 fish GCF_002007445.1_ASM200744v2 mammals GCF_002021735.1_Okis_V1 fish GCF_002093755.1_Dser1.0 invertebrate +GCF_002099425.1_phaCin_unsw_v4.1 mammals GCF_002162155.1_WEW_v2.0 plants GCF_002201575.1_ASM220157v1 mammals GCF_002263795.1_ARS-UCD1.2 mammals GCF_002263795.2_ARS-UCD1.3 mammals GCF_002532875.1_vjacob_1.0 invertebrate GCF_002571385.1_Stylophora_pistillata_v1 invertebrate GCF_002706865.1_ASM270686v1 invertebrate GCF_002776525.2_ASM277652v2 primates GCF_002776525.3_ASM277652v3 primates GCF_002776525.4_ASM277652v4 primates GCF_002806865.1_ASM280686v2 plants GCF_002814215.1_Sedor1 fish GCF_002837175.2_ASM283717v2 mammals GCF_002870075.1_Lsat_Salinas_v7 plants GCF_002870075.2_Lsat_Salinas_v7 plants