3f6d3b9b6ecc50930f78bc9ce752b0b0950590d5 lrnassar Mon Mar 11 09:58:47 2024 -0700 Adding enigma tracks html page, refs #32914 diff --git src/hg/makeDb/trackDb/human/trackDb.enigmaTracks.ra src/hg/makeDb/trackDb/human/trackDb.enigmaTracks.ra index c5f65d7..3196f74 100644 --- src/hg/makeDb/trackDb/human/trackDb.enigmaTracks.ra +++ src/hg/makeDb/trackDb/human/trackDb.enigmaTracks.ra @@ -4,62 +4,67 @@ shortLabel ENIGMA BRCA1/BRCA2 specs 1.1.0 longLabel ENIGMA BRCA1/BRCA2 Panel Specifications of ACMG/AMP Guidelines version 1.1.0 pennantIcon New red ../goldenPath/newsarch.html#XXXXXX "New Xxx. XX, XXX" track BRCAclinDomains shortLabel BRCA1/BRCA2 protein domains 1.1.0 longLabel BRCA1/BRCA2 ENIGMA clinically relevant protein domains (ENIGMA specs version 1.1.0) superTrack enigma hide priority 1 visibility pack type bigBed 9 + 4 itemRgb on mouseOverField _mouseOver bigDataUrl /gbdb/$D/bbi/enigma/BRCAclinDomains.bb noScoreFilter on +html enigma track BRCAexonWeights shortLabel BRCA1/BRCA2 exon weights 1.1.0 longLabel BRCA1/BRCA2 exon-specific weights for PM5_PTC code (ENIGMA specs version 1.1.0) superTrack enigma hide priority 2 visibility pack type bigBed 8 + 15 mouseOverField _mouseOver bigDataUrl /gbdb/$D/bbi/enigma/BRCAexonWeights.bb noScoreFilter on +html enigma track BRCAfunctionalAssays shortLabel BRCA1/BRCA2 functional assays 1.1.0 longLabel BRCA1/BRCA2 reviewed functional assays for PS3 and BS3 codes (ENIGMA specs version 1.1.0) superTrack enigma hide priority 3 visibility pack type bigBed 9 + 15 itemRgb on mouseOverField _mouseOver bigDataUrl /gbdb/$D/bbi/enigma/BRCAfunctionalAssays.bb noScoreFilter on +html enigma track BRCAsplicing shortLabel BRCA1/BRCA2 splicing 1.1.0 longLabel BRCA1/BRCA2 variant codes according to PVS1 decision trees (ENIGMA specs version 1.1.0) superTrack enigma hide priority 4 visibility pack type bigBed 9 + 9 itemRgb on mouseOverField _mouseOver bigDataUrl /gbdb/$D/bbi/enigma/BRCAsplicing.bb noScoreFilter on +html enigma track BRCAmla shortLabel BRCA1/BRCA2 likelihood for PP4 and BP5 longLabel BRCA1/BRCA2 multifactorial likelihood analysis for PP4 and BP5 ACMG codes (Parsons et al. 2019) superTrack enigma hide priority 5 visibility pack type bigBed 9 + 67 itemRgb on mouseOverField _mouseOver bigDataUrl /gbdb/$D/bbi/enigma/BRCAmfa.bb noScoreFilter on +html enigma