79742b17c9cf66a054d07369d0141836ce2752fb hiram Mon Feb 19 15:08:20 2024 -0800 catching up four assemblies no redmine diff --git src/hg/makeDb/doc/vgpAsmHub/vgp.taxId.asmId.class.txt src/hg/makeDb/doc/vgpAsmHub/vgp.taxId.asmId.class.txt index de57638..7513b5b 100644 --- src/hg/makeDb/doc/vgpAsmHub/vgp.taxId.asmId.class.txt +++ src/hg/makeDb/doc/vgpAsmHub/vgp.taxId.asmId.class.txt @@ -1,15 +1,16 @@ +8296 GCA_002915635.3_AmbMex60DD amphibians 30522 GCA_003369685.2_UOA_Angus_1 mammals 59729 GCA_003957525.1_bTaeGut1_v1.h birds 59729 GCA_003957525.2_bTaeGut1.4.alt birds 9244 GCA_003957555.2_bCalAnn1_v1.p birds 59729 GCA_003957565.2_bTaeGut1_v1.p birds 9244 GCA_003957575.1_bCalAnn1_v1.h birds 2489341 GCA_004011185.1_bStrHab1_v1.h birds 2489341 GCA_004027225.2_bStrHab1.2.pri birds 9258 GCA_004115175.2_mOrnAna1.alt.v3 mammals 9258 GCA_004115215.3_mOrnAna1.pri.v3 mammals 89673 GCA_004115245.1_mPhyDis1_v1.h mammals 89673 GCA_004115245.2_mPhyDis1.alti.v3 mammals 59479 GCA_004115265.2_mRhiFer1_v1.p mammals 59479 GCA_004115295.1_mRhiFer1_v1.h mammals 63155 GCA_007364235.1_fArcCen1_v1.h fish @@ -180,30 +181,31 @@ 48850 GCA_023853755.1_mTamTet1.alt mammals 109475 GCA_024140225.1_mSunEtr1.alt.cur mammals 99487 GCA_024166345.1_mEleMax1_alternate_haplotype mammals 9031 GCA_024206055.2_ASM2420605v2 birds 246179 GCA_024294585.1_rVipLat1.pri reptiles 246179 GCA_024294605.1_rVipLat1.alt reptiles 10013 GCA_024803745.1_mThoBot1.0.p mammals 48708 GCA_025094165.1_mMesDen1_alternate_haplotype mammals 286002 GCA_025201965.1_rGopFla2.pat.asm reptiles 48708 GCA_025265405.1_mMesDen1_primary_haplotype mammals 70687 GCA_026018925.1_mTupTan1 mammals 372063 GCA_026229955.1_mPerMan1.0.p mammals 202280 GCA_026419925.1_bHarHar1 birds 27615 GCA_026419965.1_mKogBre1_haplotype_1 mammals 27615 GCA_026419985.1_mKogBre1_haplotype_2 mammals +8319 GCA_026652325.1_ASM2665232v1 amphibians 81927 GCA_026979555.1_bVidCha1_purged_dups_haplotype birds 81927 GCA_026979565.1_bVidCha1_merged_haplotype birds 65483 GCA_027172095.1_rPodRaf1.alt reptiles 233779 GCA_027382365.2_aSpeBom1.2.alt amphibians 310915 GCA_027382375.1_fPanHyp1.alt fish 9470 GCA_027406535.1_mNycCou1.alt primates 30427 GCA_027406555.1_bHaeMex1.alt birds 9031 GCA_027408205.1_bGalGal5.alt birds 9031 GCA_027408225.1_bGalGal5.pri birds 9031 GCA_027408255.1_bGalGal4.alt birds 110931 GCA_027409165.1_mCynVol1.alt mammals 110931 GCA_027409185.1_mCynVol1.pri mammals 13676 GCA_027409835.1_fScoJap1.alt fish 8351 GCA_027410445.1_aDisPic1.pri amphibians 8351 GCA_027410455.1_aDisPic1.alt amphibians @@ -252,30 +254,32 @@ 9315 GCA_028389975.1_mMacEug1.alt mammals 495146 GCA_028390025.1_aPseCor3.hap2 amphibians 34844 GCA_028451465.1_mEreDor1.pri mammals 75485 GCA_028500815.1_bRisTri1.patW.cur.20221130 birds 34844 GCA_028500835.1_mEreDor1.alt mammals 75485 GCA_028501385.1_bRisTri1.mat.cur.20221130 birds 27606 GCA_028564815.1_mEubGla1.hap2 mammals 27606 GCA_028571275.1_mEubGla1.hap1 mammals 77598 GCA_028571665.1_mHetBru1.alt mammals 77598 GCA_028571685.1_mHetBru1.pri mammals 9226 GCA_028858555.1_bAraAra1.hap2 birds 9117 GCA_028858595.1_bGruAme1.pat birds 57412 GCA_028858625.1_bColStr4.hap2 birds 57412 GCA_028858725.1_bColStr4.hap1 birds 9226 GCA_028858755.1_bAraAra1.hap1 birds +9598 GCA_028858805.1_NHGRI_mPanTro3-v1.1-hic.freeze_alt primates +9600 GCA_028885525.1_NHGRI_mPonPyg2-v1.1-hic.freeze_alt primates 327740 GCA_029493135.1_aHylSar1.hap2 amphibians 2546036 GCA_029633845.1_fLamInc1.hap1 fish 27720 GCA_029633855.1_fHopMal1.hap1 fish 27720 GCA_029633875.1_fHopMal1.hap2 fish 460621 GCA_029931755.1_rEulEur1.hap2 reptiles 9785 GCA_030014295.1_mLoxAfr1.hap2 mammals 2290929 GCA_030014385.1_fTriRos1.hap1 fish 2290929 GCA_030015355.1_fTriRos1.hap2 fish 94835 GCA_030020295.1_rGavGan2.hap2 reptiles 9785 GCA_030020305.1_mLoxAfr1.hap1 mammals 94835 GCA_030020385.1_rGavGan2.hap1 reptiles 143292 GCA_030020945.1_mManPen7.hap2 mammals 29137 GCA_030020955.1_mDugDug1.hap2 mammals 575201 GCA_030028035.1_mHipAmp2.hap1 mammals 1983395 GCA_030028105.1_sMobBir1.hap1 sharks