bf5fc23cef14d9555d2ba4edbd7368a1e73334eb
lrnassar
  Thu Feb 22 15:25:54 2024 -0800
Adding visibilities to the subtracks, refs #32919

diff --git src/hg/makeDb/trackDb/human/trackDb.enigmaTracks.ra src/hg/makeDb/trackDb/human/trackDb.enigmaTracks.ra
index 3227b77..c5f65d7 100644
--- src/hg/makeDb/trackDb/human/trackDb.enigmaTracks.ra
+++ src/hg/makeDb/trackDb/human/trackDb.enigmaTracks.ra
@@ -1,60 +1,65 @@
 track enigma
 superTrack on
 group phenDis
 shortLabel ENIGMA BRCA1/BRCA2 specs 1.1.0
 longLabel ENIGMA BRCA1/BRCA2 Panel Specifications of ACMG/AMP Guidelines version 1.1.0
 pennantIcon New red ../goldenPath/newsarch.html#XXXXXX "New Xxx. XX, XXX"
 
 track BRCAclinDomains
 shortLabel BRCA1/BRCA2 protein domains 1.1.0
 longLabel BRCA1/BRCA2 ENIGMA clinically relevant protein domains (ENIGMA specs version 1.1.0)
 superTrack enigma hide
 priority 1
+visibility pack
 type bigBed 9 + 4
 itemRgb on
 mouseOverField _mouseOver
 bigDataUrl /gbdb/$D/bbi/enigma/BRCAclinDomains.bb
 noScoreFilter on
 
 track BRCAexonWeights
 shortLabel BRCA1/BRCA2 exon weights 1.1.0
 longLabel BRCA1/BRCA2 exon-specific weights for PM5_PTC code (ENIGMA specs version 1.1.0)
 superTrack enigma hide
 priority 2
+visibility pack
 type bigBed 8 + 15
 mouseOverField _mouseOver
 bigDataUrl /gbdb/$D/bbi/enigma/BRCAexonWeights.bb
 noScoreFilter on
 
 track BRCAfunctionalAssays
 shortLabel BRCA1/BRCA2 functional assays 1.1.0
 longLabel BRCA1/BRCA2 reviewed functional assays for PS3 and BS3 codes (ENIGMA specs version 1.1.0)
 superTrack enigma hide
 priority 3
+visibility pack
 type bigBed 9 + 15
 itemRgb on
 mouseOverField _mouseOver
 bigDataUrl /gbdb/$D/bbi/enigma/BRCAfunctionalAssays.bb
 noScoreFilter on
 
 track BRCAsplicing
 shortLabel BRCA1/BRCA2 splicing 1.1.0
 longLabel BRCA1/BRCA2 variant codes according to PVS1 decision trees (ENIGMA specs version 1.1.0)
 superTrack enigma hide
 priority 4
+visibility pack
 type bigBed 9 + 9
 itemRgb on
 mouseOverField _mouseOver
 bigDataUrl /gbdb/$D/bbi/enigma/BRCAsplicing.bb
 noScoreFilter on
 
 track BRCAmla
 shortLabel BRCA1/BRCA2 likelihood for PP4 and BP5
 longLabel BRCA1/BRCA2 multifactorial likelihood analysis for PP4 and BP5 ACMG codes (Parsons et al. 2019)
 superTrack enigma hide
 priority 5
+visibility pack
 type bigBed 9 + 67
 itemRgb on
 mouseOverField _mouseOver
 bigDataUrl /gbdb/$D/bbi/enigma/BRCAmfa.bb
 noScoreFilter on