b57ac0715b42f8f23e512e2c9bdb312b48d1933d
chmalee
  Wed Feb 28 11:44:47 2024 -0800
Staging gnomAD v2.1.1 non-cancer filter set, ready for QA, refs #32916

diff --git src/hg/makeDb/doc/hg19.txt src/hg/makeDb/doc/hg19.txt
index ce3c7a1..61bf428 100644
--- src/hg/makeDb/doc/hg19.txt
+++ src/hg/makeDb/doc/hg19.txt
@@ -35311,15 +35311,21 @@
    -target2bit="/hive/data/genomes/asmHubs/GCF/019/923/935/GCF_019923935.1/GCF_019923935.1.2bit" \
 -targetSizes="/hive/data/genomes/asmHubs/GCF/019/923/935/GCF_019923935.1/GCF_019923935.1.chrom.sizes.txt" \
    GCF_019923935.1 hg19) > rbest.log 2>&1
 
     grep -w real rbest.log | sed -e 's/^/    # /;'
     # real	313m32.842s
 
     sed -e 's/^/    # /;' fb.GCF_019923935.1.chainRBest.Hg19.txt
     # 1289005387 bases of 2622460639 (49.153%) in intersection
 
 real	1465m27.987s
 user	0m3.016s
 sys	0m2.691s
 
 ##############################################################################
+
+##############################################################################
+# Add cancer/non-cancer filter to gnomAD v2.1.1  - Feb 28, 2024 - ChrisL - DONE
+##############################################################################
+# see /hive/data/inside/gnomAD/v1.1.1/2024-02-20/README
+# for the steps