34a93745ddac680c98b63da5f035cb5d8f528a44 jnavarr5 Tue Mar 26 16:29:38 2024 -0700 Redesigning the layout of the customTrack help page. Adding a table of contents, refs #19736 diff --git src/hg/htdocs/goldenPath/help/customTrack.html src/hg/htdocs/goldenPath/help/customTrack.html index abcb651..8327d48 100755 --- src/hg/htdocs/goldenPath/help/customTrack.html +++ src/hg/htdocs/goldenPath/help/customTrack.html @@ -1,13 +1,37 @@

Displaying Your Own Annotations in the Genome Browser

What are custom annotation tracks?

Building and sharing a custom track
Example #1: Simple annotation file
Example #2: Two annotations track in one file
Example #3a: BED example with multiple blocks
Example #3b: Simple annotation in bigBed format
Example #4: URL substitution using the 'name' field

Loading a custom track into the Genome Browser
Displaying and managing custom tracks

Creating Browser lines for annotations
Defining track lines for annotations

Sharing your annotation track with others

Example #5: Loading a custom track via the URL
Example #6: Constructing a URL using the bigDataUrl setting

Troubleshooting annotation display problems

Displaying Your Own Annotations in the Genome Browser

Table of Contents