8ccceea1c52492b6a869af8de3190a387d4b6550
braney
Tue Mar 12 13:41:09 2024 -0700
added exportedDataHubs dialog and code to deal with quickLifted hubs
diff --git src/hg/hgTracks/menu.c src/hg/hgTracks/menu.c
index dbc19a1..5cb42fc 100644
--- src/hg/hgTracks/menu.c
+++ src/hg/hgTracks/menu.c
@@ -7,30 +7,31 @@
#include "dystring.h"
#include "ensFace.h"
#include "agpFrag.h"
#include "ctgPos.h"
#include "hCommon.h"
#include "htmshell.h"
#include "hash.h"
#include "wikiLink.h"
#include "web.h"
#include "geoMirror.h"
#include "hgTracks.h"
#include "trackHub.h"
#include "extTools.h"
#include "trackVersion.h"
#include "chromAlias.h"
+#include "exportedDataHubs.h"
/* list of links to display in a menu */
/* a link with an empty name is displayed as a horizontal separator line */
struct hotLink
{
struct hotLink *next;
char *name;
char *url;
char *id;
char *mouseOver;
char *onClick;
char *shortcut;
boolean inactive; /* greyed out */
boolean external;
};
@@ -237,30 +238,40 @@
menuStr = replaceChars(menuStr, "", "OPTIONAL_PROJECT_MENU_END -->");
// Add Recommended Track Sets to Genome Browser menu (if any for this assembly)
// TODO: consider splitting the recommended track sets config file into separate files by database,
// so we don't need to read file to see whether to add menu item
if (recTrackSetsEnabled() && recTrackSetsForDb())
{
#define recTrackSetsMenuItemId "recTrackSetsMenuItem"
struct dyString *menuItemDs = dyStringCreate("
Recommended Track Sets",
recTrackSetsMenuItemId);
menuStr = replaceChars(menuStr, "",
dyStringCannibalize(&menuItemDs));
if (stringIn(recTrackSetsMenuItemId, menuStr))
jsOnEventById("click", recTrackSetsMenuItemId, "showRecTrackSetsPopup(); return false;");
}
+if (exportedDataHubsEnabled())
+ {
+ #define exportedDataHubsMenuItemId "exportedDataHubsMenuItem"
+ struct dyString *menuItemDs = dyStringCreate("Exported Data Hubs",
+ exportedDataHubsMenuItemId);
+ menuStr = replaceChars(menuStr, "",
+ dyStringCannibalize(&menuItemDs));
+ if (stringIn(exportedDataHubsMenuItemId, menuStr))
+ jsOnEventById("click", exportedDataHubsMenuItemId, "showExportedDataHubsPopup(); return false;");
+ }
// Create top items in view menu
safef(buf, sizeof(buf), "../cgi-bin/hgTracks?%s&hgt.psOutput=on", uiVars);
appendLink(&links, buf, "PDF", "pdfLink", FALSE);
safef(buf, sizeof(buf), "%s&o=%d&g=getDna&i=mixed&c=%s&l=%d&r=%d&db=%s&%s",
hgcNameAndSettings(), winStart, chromName, winStart, winEnd, database, uiVars);
//appendLink(&links, buf, "DNA", "dnaLink", FALSE);
appendLinkWithShortcut(&links, buf, "DNA", "dnaLink", "Show DNA sequence in view", "v d", FALSE, FALSE);
safef(buf, sizeof(buf), "../cgi-bin/hgConvert?hgsid=%s&db=%s", cartSessionId(cart), database);
appendLink(&links, buf, "In Other Genomes (Convert)", "convertMenuLink", FALSE);
// add the sendTo menu
if (fileExists("extTools.ra"))
{
appendLinkWithOnclick(&links, "#", "In External Tools", "extToolLink", "Show current sequence on a third-party website", "showExtToolDialog(); return false;", "s t", FALSE, FALSE);