f1beb8040b180a7792173f00422f73335ea3385b jnavarr5 Tue Mar 12 10:47:53 2024 -0700 Adding some missing lines to the JASPAR mouse trackDb files, refs #32537 diff --git src/hg/makeDb/trackDb/ailMel1_trackDb.offsets src/hg/makeDb/trackDb/ailMel1_trackDb.offsets new file mode 100644 index 0000000..41b59b3 --- /dev/null +++ src/hg/makeDb/trackDb/ailMel1_trackDb.offsets @@ -0,0 +1,130 @@ +augustusGene 109472 +blastHg18KG 116145 +chainCanFam2 237085 +chainFelCat4 258005 +chainHg19 403975 +chainHg38 383103 +chainLepWed1 173897 +chainMm10 362231 +chainMm9 341363 +chainMonDom5 424879 +chainMusFur1 216194 +chainNetCanFam2 223118 +chainNetCanFam2Viewchain 236975 +chainNetCanFam2Viewnet 230005 +chainNetFelCat4 243958 +chainNetFelCat4Viewchain 257885 +chainNetFelCat4Viewnet 250875 +chainNetHg19 389988 +chainNetHg19Viewchain 403867 +chainNetHg19Viewnet 396887 +chainNetHg38 369116 +chainNetHg38Viewchain 382995 +chainNetHg38Viewnet 376015 +chainNetLepWed1 159718 +chainNetLepWed1Viewchain 173774 +chainNetLepWed1Viewnet 166698 +chainNetMm10 348244 +chainNetMm10Viewchain 362123 +chainNetMm10Viewnet 355143 +chainNetMm9 327390 +chainNetMm9Viewchain 341257 +chainNetMm9Viewnet 334283 +chainNetMonDom5 410860 +chainNetMonDom5Viewchain 424764 +chainNetMonDom5Viewnet 417768 +chainNetMusFur1 202103 +chainNetMusFur1Viewchain 216073 +chainNetMusFur1Viewnet 209041 +chainNetOdoRosDiv1 180863 +chainNetOdoRosDiv1Viewchain 194980 +chainNetOdoRosDiv1Viewnet 187870 +chainNetRn4 306548 +chainNetRn4Viewchain 320407 +chainNetRn4Viewnet 313437 +chainNetRn5 285728 +chainNetRn5Viewchain 299573 +chainNetRn5Viewnet 292611 +chainNetRn6 264908 +chainNetRn6Viewchain 278753 +chainNetRn6Viewnet 271791 +chainOdoRosDiv1 195110 +chainRn4 320515 +chainRn5 299679 +chainRn6 278859 +cpgIslandExt 0 +cpgIslandExtUnmasked 22759 +cpgIslandSuper 3750 +cytoBandIdeo 111800 +ensGene 111889 +est 127506 +gap 113155 +gapOverlap 139733 +gc5Base 114079 +genscan 114616 +gold 108406 +microsat 120388 +mrna 132387 +ncbiRefSeq 22631 +ncbiRefSeqCurated 22509 +ncbiRefSeqGenomicDiff 22045 +ncbiRefSeqOther 22263 +ncbiRefSeqPredicted 22393 +ncbiRefSeqPsl 22177 +nestedRepeats 117735 +netCanFam2 230111 +netFelCat4 250991 +netHg19 396991 +netHg38 376119 +netLepWed1 166817 +netMm10 355247 +netMm9 334385 +netMonDom5 417879 +netMusFur1 209158 +netOdoRosDiv1 187996 +netRn4 313541 +netRn5 292713 +netRn6 271893 +refSeqComposite 10360 +rmsk 7502 +simpleRepeat 135883 +tRNAs 140874 +tanDups 136542 +tandemDups 139617 +transMapEnsemblV4 49418 +transMapEnsemblV5 37976 +transMapEnsemblV6 26534 +transMapEstV4 103125 +transMapEstV5 97844 +transMapEstV6 92563 +transMapRefSeqV4 71433 +transMapRefSeqV5 66146 +transMapRefSeqV6 60859 +transMapRnaV4 87282 +transMapRnaV5 82001 +transMapRnaV6 76720 +transMapV4 54895 +transMapV5 43453 +transMapV6 32011 +ucscToINSDC 117329 +ucscToRefSeq 135549 +unipAliSwissprot 158733 +unipAliTrembl 158635 +unipChain 158123 +unipConflict 157488 +unipDisulfBond 158042 +unipDomain 157979 +unipInterest 158392 +unipLocCytopl 158221 +unipLocExtra 158470 +unipLocSignal 158554 +unipLocTransMemb 158303 +unipModif 157891 +unipMut 157816 +unipOther 157739 +unipRepeat 157571 +unipStruct 157634 +uniprot 144115 +windowmaskerSdust 158900 +xenoMrna 121272 +xenoRefGene 124948