Commits for gperez2

4680987207adaed1a830fc38f2b0cd34aa3f2fcf Tue Apr 16 10:03:43 2024 -0700

adding GCA_023653725.1_ASM2365372v1 vertebrate Bungarus_multicinctus per user request, refs #29545
- src/hg/makeDb/doc/asmHubs/master.run.list - lines changed 1, context: html, text, full: html, text

69ab98f9a9e22a4ca90d5dd8d71d88df5d8d09c3 Tue Apr 16 10:15:01 2024 -0700

adding Bungarus_multicinctus GCA_023653725.1_ASM2365372v1 many-banded krait (BM01 2022), refs #29545
- src/hg/makeDb/doc/vertebrateAsmHub/vertebrate.orderList.tsv - lines changed 1, context: html, text, full: html, text

c9a41bbabaadee3b802a114da96dd7ac9a7eac26 Wed Apr 17 14:13:12 2024 -0700

Adding assemblyRequest.html to the list due to the cron output, No Redmine
- src/utils/qa/linkCheckExclude - lines changed 1, context: html, text, full: html, text

961be4dce41759b9b0b921e6c42b12545ba281fb Wed Apr 17 23:57:06 2024 -0700

Adding a wrapper script for hubSearchText cron and the makeHelpDocs.sh to omit the output when there are no errors, refs #32812
- src/utils/qa/checkHubSearchCronWrapper.py - lines changed 57, context: html, text, full: html, text
- src/utils/qa/makefile - lines changed 1, context: html, text, full: html, text

afc033dfd58f19bf27c8a280463473fb9679eba9 Thu Apr 18 11:50:33 2024 -0700

adding GCF_035594765.1_rAnoCar3.1.pri vertebrate Anolis_carolinensis per user request, refs #29545
- src/hg/makeDb/doc/asmHubs/master.run.list - lines changed 1, context: html, text, full: html, text

6bad1e0c582202b4c99cc503825ce5c22deb944b Thu Apr 18 11:56:11 2024 -0700

adding Anolis_carolinensis GCF_035594765.1_rAnoCar3.1.pri green anole (JA03-04 2024), refs #29545
- src/hg/makeDb/doc/vertebrateAsmHub/vertebrate.orderList.tsv - lines changed 1, context: html, text, full: html, text

226199234277e9c5d246ecce187873d8e8805ebc Fri Apr 19 17:45:17 2024 -0700

Incorporating Jairo's feedback for docker.html, refs #33491
- src/hg/htdocs/goldenPath/help/docker.html - lines changed 90, context: html, text, full: html, text

5eea974e049ff8f2c80085c31a50ddae484529ae Sun Apr 21 14:19:46 2024 -0700

Making hg19 abSplice into a native track, refs #33251
- src/hg/makeDb/doc/hg19.txt - lines changed 203, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/abSplice.html - lines changed 76, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/abSplice.ra - lines changed 16, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/trackDb.ra - lines changed 1, context: html, text, full: html, text

624a173c2cecab78c30628711418dd562fee375a Sun Apr 21 14:28:13 2024 -0700

Adding the custom Python script for the hg19 abSplice track, refs #33251
- src/hg/makeDb/outside/abSplice/AbSplice.hg19.makedoc - lines changed 184, context: html, text, full: html, text