5b7d2ac73787b05638a965d4305c4dd2fe944b9e max Thu Apr 18 04:34:40 2024 -0700 fixing uniprot docs, thanks to @markd diff --git src/hg/makeDb/trackDb/uniprot.html src/hg/makeDb/trackDb/uniprot.html index 4a55ab6..1bdc451 100644 --- src/hg/makeDb/trackDb/uniprot.html +++ src/hg/makeDb/trackDb/uniprot.html @@ -109,33 +109,31 @@ Extracellular Domains, Transmembrane Domains, and Cytoplamsic domains subtracks.</p> <p> Mouse over a feature to see the full UniProt annotation comment. For variants, the mouse over will show the full name of the UniProt disease acronym. </p> <p> The subtracks for domains related to subcellular location are sorted from outside to inside of the cell: <span style="color: rgb(255,0,150)"><b>Signal peptide</b></span>, <span style="color: rgb(0,150,255)"><b>extracellular</b></span>, <span style="color: rgb(0,150,0)"> <b>transmembrane</b></span>, and <span style="color: rgb(255,150,0)"><b>cytoplasmic</b></span>. </p> <p> -In the "UniProt Modifications" track, lipoification sites are highlighted in -<span style="color: rgb(12,12,120)"><b>dark blue</b></span>, glycosylation sites in -<span style="color: rgb(0,100,100)"><b>dark green</b></span>, and phosphorylation in +Features in the "UniProt Modifications" track are drawn in <span style="color: rgb(200,200,0)"><b>light green</b></span>.</p> <p> Duplicate annotations are removed as far as possible: if a TrEMBL annotation has the same genome position and same feature type, comment, disease and mutated amino acids as a SwissProt annotation, it is not shown again. Two annotations mapped through different protein sequence alignments but with the same genome coordinates are only shown once. </p> <p>On the configuration page of this track, you can choose to hide any TrEMBL annotations. This filter will also hide the UniProt alternative isoform protein sequences because both types of information are less relevant to most users. Please contact us if you want more detailed filtering features.</p> <p>Note that for the human hg38 assembly and SwissProt annotations, there