1f8eb9eed9dc2b3541cc190331541757d183281f markd Sat Apr 13 09:23:37 2024 -0700 combined MGC and ORFeome into a super track on hg38, hg19, and mm10. RM 13827 diff --git src/hg/makeDb/trackDb/orfeomeMrna.html src/hg/makeDb/trackDb/orfeomeMrna.html index f35e035..cfa8c89 100644 --- src/hg/makeDb/trackDb/orfeomeMrna.html +++ src/hg/makeDb/trackDb/orfeomeMrna.html @@ -1,37 +1,37 @@

Description

-This track shows alignments of $organism clones from the +This track show alignments of $organism clones from the ORFeome Collaboration. The goal of the project is to be an "unrestricted source of fully sequence-validated full-ORF human cDNA clones in a format allowing easy transfer of the ORF sequences into virtually any type of expression vector. A major goal is to provide -at least one fully-sequenced full-ORF clone for each human gene." +at least one fully-sequenced full-ORF clone for each human, mouse, and zebrafish gene. This track is updated automatically as new clones become available.

Display Conventions and Configuration

The track follows the display conventions for gene prediction tracks.

Methods

ORFeome $organism clones were obtained from GenBank and aligned against the genome using the blat program. When a single clone aligned in multiple places, the alignment having the highest base identity was found. Only alignments having a base identity level within 0.5% of the best and at least 96% base identity with the genomic sequence were kept.

Credits and References

Visit the ORFeome Collaboration members page for a list of credits and references.