1f8eb9eed9dc2b3541cc190331541757d183281f markd Sat Apr 13 09:23:37 2024 -0700 combined MGC and ORFeome into a super track on hg38, hg19, and mm10. RM 13827 diff --git src/hg/makeDb/trackDb/orfeomeMrna.html src/hg/makeDb/trackDb/orfeomeMrna.html index f35e035..cfa8c89 100644 --- src/hg/makeDb/trackDb/orfeomeMrna.html +++ src/hg/makeDb/trackDb/orfeomeMrna.html @@ -1,37 +1,37 @@ <h2>Description</h2> <p> -This track shows alignments of $organism clones from the +This track show alignments of $organism clones from the <a href="http://www.orfeomecollaboration.org/" target="_blank"> ORFeome Collaboration</a>. The goal of the project is to be an "unrestricted source of fully sequence-validated full-ORF human cDNA clones in a format allowing easy transfer of the ORF sequences into virtually any type of expression vector. A major goal is to provide -at least one fully-sequenced full-ORF clone for each human gene." +at least one fully-sequenced full-ORF clone for each human, mouse, and zebrafish gene. This track is updated automatically as new clones become available. </p> <h2>Display Conventions and Configuration</h2> <p> The track follows the display conventions for <a href="../goldenPath/help/hgTracksHelp.html#GeneDisplay">gene prediction tracks</a>.</p> <h2>Methods</h2> <p> ORFeome $organism clones were obtained from GenBank and aligned against the genome using the blat program. When a single clone aligned in multiple places, the alignment having the highest base identity was found. Only alignments having a base identity level within 0.5% of the best and at least 96% base identity with the genomic sequence were kept. </p> <h2>Credits and References</h2> <p> Visit the ORFeome Collaboration <a href="http://www.orfeomecollaboration.org/?pageID=32" target="_blank"> members page</a> for a list of credits and references. </p>