Commits for hiram

1ccb8ac66ce9d7f004751065aefd285737da1d9f Mon May 27 13:01:52 2024 -0700

remove assembly never built not needed refs #29545
- src/hg/makeDb/doc/asmHubs/master.run.list - lines changed 1, context: html, text, full: html, text

eab19783dc8a751d40d5b1c6c7da81d10a7a4d99 Mon May 27 17:47:09 2024 -0700

catching up completed builds refs #29545
- src/hg/makeDb/doc/bacteriaAsmHub/bacteria.orderList.tsv - lines changed 32, context: html, text, full: html, text

4e902ad3b9b51edc9fd753bd7f6a77bf978ad18f Tue May 28 11:57:44 2024 -0700

catching up to completed builds adding 16 sequences refs #29545
- src/hg/makeDb/doc/viralAsmHub/viral.orderList.tsv - lines changed 230, context: html, text, full: html, text

7bfe0194d5fe28ee32472a45199ad0f5427fe795 Tue May 28 11:59:05 2024 -0700

catching up to completed builds adding 32 sequences refs #29545
- src/hg/makeDb/doc/plantsAsmHub/plants.orderList.tsv - lines changed 62, context: html, text, full: html, text

1afa30fb96e679291e406c7143ef5d296fd7686a Tue May 28 20:08:20 2024 -0700

GCA_000750555.1_ASM75055v1 is already in legacy refs #29545
- src/hg/makeDb/doc/bacteriaAsmHub/bacteria.orderList.tsv - lines changed 1, context: html, text, full: html, text

760be579917b7fb47bf760b0850a318a64bb0afa Wed May 29 11:09:59 2024 -0700

adding an Indian cobra per user requesr refs #29545
- src/hg/makeDb/doc/vertebrateAsmHub/vertebrate.orderList.tsv - lines changed 2, context: html, text, full: html, text

8b9c593a175ed7a8cb2fb69a810ba806e86721f9 Wed May 29 11:36:17 2024 -0700

catching up master.run.list with tsv listings refs #29545
- src/hg/makeDb/doc/asmHubs/master.run.list - lines changed 2, context: html, text, full: html, text

ef367b73c79c5ad168ead9ad42cd384a1c4e6452 Wed May 29 12:54:42 2024 -0700

catching up tsv list with master.run.list refs #29545
- src/hg/makeDb/doc/invertebrateAsmHub/invertebrate.orderList.tsv - lines changed 5, context: html, text, full: html, text

1c4294c39020e784e893810c63c42031a754f132 Wed May 29 12:55:14 2024 -0700

catching up tsv list with master.run.list refs #29545
- src/hg/makeDb/doc/mammalsAsmHub/mammals.orderList.tsv - lines changed 5, context: html, text, full: html, text

abd40be98069342ad0281cdcb42c2298be33e1cb Thu May 30 09:46:50 2024 -0700

special case some more invertebrate names refs #29545
- src/hg/makeDb/doc/asmHubs/commonNames.pl - lines changed 7, context: html, text, full: html, text

32cbcfd8e5641b6562603e225a81fbe515731b61 Thu May 30 09:47:54 2024 -0700

refSeq update adding 37 refs #29545
- src/hg/makeDb/doc/fungiAsmHub/fungi.orderList.tsv - lines changed 40, context: html, text, full: html, text

104dfe4740b3363b058a8d5e983ed56848c7cb0b Thu May 30 11:18:11 2024 -0700

RefSeq update adding 34 assemblies refs #29545
- src/hg/makeDb/doc/invertebrateAsmHub/invertebrate.orderList.tsv - lines changed 34, context: html, text, full: html, text

2727be6ec3249dd652f8527c491275414297c3b4 Thu May 30 11:37:08 2024 -0700

refSeq update adding 23 assemblies refs #29545
- src/hg/makeDb/doc/fishAsmHub/fish.orderList.tsv - lines changed 75, context: html, text, full: html, text

53cf1f5a5e8202b5358beabdb42287776c717595 Thu May 30 11:42:03 2024 -0700

refSeq update adding 20 assemblies refs #29545
- src/hg/makeDb/doc/birdsAsmHub/birds.orderList.tsv - lines changed 69, context: html, text, full: html, text

d4d7392ddf8074b036de308d83f6cd608e008cea Thu May 30 12:19:22 2024 -0700

refSeq update adding 12 assemblies refs #29545
- src/hg/makeDb/doc/plantsAsmHub/plants.orderList.tsv - lines changed 12, context: html, text, full: html, text

bbc6a6bd58f21079981d41c4b99c2ef6fb0c0647 Thu May 30 12:20:18 2024 -0700

refSeq update adding 13 assemblies refs #29545
- src/hg/makeDb/doc/vertebrateAsmHub/vertebrate.orderList.tsv - lines changed 36, context: html, text, full: html, text

98c798121621aa4671ddad936a5a37ff2ac6c57a Thu May 30 12:26:17 2024 -0700

refSeq update adding 151 assmblies refs #29545
- src/hg/makeDb/doc/asmHubs/master.run.list - lines changed 151, context: html, text, full: html, text

47232476dfffb3b6d05e6a2f8c509dd84c15edb8 Thu May 30 12:29:05 2024 -0700

refSeq update adding 12 assmblies refs #29545
- src/hg/makeDb/doc/mammalsAsmHub/mammals.orderList.tsv - lines changed 94, context: html, text, full: html, text