2d05d30ed4df1612d72ba84c812d004de935b122 angie Fri May 17 16:08:54 2024 -0700 Add lib module mmHash (memory-mapped hash), util tabToMmHash, and hgPhyloPlace support for using mmHash files instead of tab-separated files for metadata and name lookup. Using mmHash for name lookup saves about 50-55 seconds for SARS-CoV-2 hgPhyloPlace name/ID queries. diff --git src/utils/tabToMmHash/makefile src/utils/tabToMmHash/makefile new file mode 100644 index 0000000..cd572fd --- /dev/null +++ src/utils/tabToMmHash/makefile @@ -0,0 +1,3 @@ +kentSrc = ../.. +A = tabToMmHash +include $(kentSrc)/inc/userApp.mk