Commits for chmalee

v465_base to v466_preview (2024-05-13 to 2024-05-20) v466

bfbc825c0932c9444ba781517f9cf4034aac233b Mon May 13 14:43:00 2024 -0700

• Change hgTracks view dna link to not have the hgsid twice, refs #33691
  • src/hg/hgTracks/menu.c - lines changed 2, context: html, text, full: html, text

e2ed08acdca884ab4bceaaab4a7386437a846634 Tue May 14 12:12:18 2024 -0700

• Fix native assemblies not being selectable in hgGateway autocomplete, refs #33572
  • src/hg/js/hgGateway.js - lines changed 1, context: html, text, full: html, text

c6ce277e36a537437a04146c8fa7adebb40428ff Wed May 15 12:10:42 2024 -0700

• Libify some searching code so checkHgFindSpec can use it. Make checkHgFindSpec use the same code path as hgSearch so it can correctly test the search correctly, refs #33731
  • src/hg/cgilib/cartTrackDb.c - lines changed 80, context: html, text, full: html, text
  • src/hg/checkHgFindSpec/checkHgFindSpec.c - lines changed 10, context: html, text, full: html, text
  • src/hg/checkHgFindSpec/makefile - lines changed 1, context: html, text, full: html, text
  • src/hg/hgSearch/hgSearch.c - lines changed 76, context: html, text, full: html, text
  • src/hg/hgTables/hgTables.c - lines changed 1, context: html, text, full: html, text
  • src/hg/hgTracks/hgTracks.c - lines changed 1, context: html, text, full: html, text
  • src/hg/hgVai/hgVai.c - lines changed 1, context: html, text, full: html, text
  • src/hg/hubApi/search.c - lines changed 69, context: html, text, full: html, text
  • src/hg/inc/cartTrackDb.h - lines changed 6, context: html, text, full: html, text
  • src/hg/inc/hgFind.h - lines changed 9, context: html, text, full: html, text
  • src/hg/lib/hgFind.c - lines changed 34, context: html, text, full: html, text

877d275fba2154784c6dd114641ad9ba7881a860 Thu May 16 10:18:51 2024 -0700

• Close div when printing exported data hubs, refs #33700
  • src/hg/hgTracks/exportedDataHubs.c - lines changed 1, context: html, text, full: html, text

747cedcf600f86c8d981ab597c94b89e178b9ed6 Thu May 16 10:19:28 2024 -0700

• Remove click & drag to scroll tooltip from hgTracks image, refs #33700
  • src/hg/js/utils.js - lines changed 3, context: html, text, full: html, text

dde908e5381a6da2e78aea5c8ae38c6dcff2cd46 Tue Feb 6 09:46:42 2024 -0800

• Staging gnomAD v4, including reorganizing tracks so v4.1 bigBed are first after the v4 VCF, description pages changes and makedoc, refs #33746
  • src/hg/makeDb/doc/hg38/gnomad.txt - lines changed 189, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg38/gnomad.alpha.ra - lines changed 346, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg38/gnomad.ra - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg38/gnomadV4.1.html - lines changed 298, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg38/trackDb.ra - lines changed 2, context: html, text, full: html, text

00d05b703b0cb8fccd9dc7b6685db685a90fff1e Thu May 16 15:45:58 2024 -0700

• Remove old gnomAD PLI track from gnomad alpha ra file, refs #33746
  • src/hg/makeDb/trackDb/human/hg38/gnomad.alpha.ra - lines changed 78, context: html, text, full: html, text