b31907d700c1fe956e4e4c20e64d91de027d7c84 markd Tue May 14 02:03:33 2024 -0700 merge blatHuge implementation diff --git src/blat/test/intron50k/test1.psl src/blat/test/intron50k/test1.psl new file mode 100644 index 0000000..4dbbe72 --- /dev/null +++ src/blat/test/intron50k/test1.psl @@ -0,0 +1,6 @@ +psLayout version 3 + +match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts + match match count bases count bases name size start end name size start end count +--------------------------------------------------------------------------------------------------------------------------------------------------------------- +600 0 0 0 0 0 2 60200 + query 600 0 600 chr16part 100000 10000 70800 3 200,199,201, 0,200,399, 10000,60200,70599,