b31907d700c1fe956e4e4c20e64d91de027d7c84 markd Tue May 14 02:03:33 2024 -0700 merge blatHuge implementation diff --git src/blat/test/v29skips/ex1_reference.psl src/blat/test/v29skips/ex1_reference.psl deleted file mode 100644 index 506312a..0000000 --- src/blat/test/v29skips/ex1_reference.psl +++ /dev/null @@ -1,6 +0,0 @@ -psLayout version 3 - -match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts - match match count bases count bases name size start end name size start end count ---------------------------------------------------------------------------------------------------------------------------------------------------------------- -4478 3 0 0 1 3 0 0 + genomicMrnaSCA2 4484 0 4484 FnaSCA2 4481 0 4481 2 699,3782, 0,702, 0,699,